JM: Joint Modeling of Longitudinal and Survival Data

Shared parameter models for the joint modeling of longitudinal and time-to-event data.

Author
Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
Date of publication
2016-09-14 18:50:37
Maintainer
Dimitris Rizopoulos <d.rizopoulos@erasmusmc.nl>
License
GPL (>= 2)
Version
1.4-5
URLs

View on CRAN

Man pages

aids
Didanosine versus Zalcitabine in HIV Patients
anova
Anova Method for Fitted Joint Models
aucJM
Time-Dependent AUCs for Joint Models
coef
Estimated Coefficients for Joint Models
crLong
Transform Competing Risks Data in Long Format
DerivIntSplines
Derivatives and Integrals of B-splines and Natural Cubic...
dynCJM
A Dynamic Discrimination Index for Joint Models
fitted
Fitted Values for Joint Models
JM
Joint Modeling of Longitudinal and Time-to-Event Data in R
jointModel
Joint Models for Longitudinal and Survival Data
jointModelObject
Fitted jointModel Object
pbc
Mayo Clinic Primary Biliary Cirrhosis Data
piecewiseExp.ph
Proportional Hazards Models with Piecewise Constant Baseline...
plot
Plot Diagnostics for Joint Models
plot-rocJM
Plot Method for rocJM Objects
plot-survfitJM
Plot Method for survfitJM Objects
prederrJM
Prediction Errors for Joint Models
predict
Predictions for Joint Models
prothro
Prednisone versus Placebo in Liver Cirrhosis Patients
ranef
Random Effects Estimates for Joint Models
residuals
Residuals for Joint Models
rocJM
Predictive Accuracy Measures for Longitudinal Markers under a...
simulate
Simulate from Joint Models.
summary.weibull.frailty
Summary Method for weibull.frailty Objects
survfitJM
Prediction in Joint Models
wald.strata
Wald Test for Stratification Factors
weibull.frailty
Weibull Model with Gamma Frailties
xtable
xtable Method from Joint Models.

Files in this package

JM
JM/inst
JM/inst/CITATION
JM/inst/NEWS
JM/NAMESPACE
JM/data
JM/data/aids.id.rda
JM/data/pbc2.id.rda
JM/data/pbc2.rda
JM/data/prothros.rda
JM/data/aids.rda
JM/data/prothro.rda
JM/R
JM/R/aucJM.jointModel.R
JM/R/wald.strata.R
JM/R/rocJM.R
JM/R/jointModel.R
JM/R/gr.longWB.R
JM/R/splinePHLaplace.fit.R
JM/R/dynCJM.coxph.R
JM/R/anova.jointModel.R
JM/R/ranef.jointModel.R
JM/R/predict.jointModel.R
JM/R/jacobian.R
JM/R/gr.longPC.R
JM/R/makepredictcall.dbs.R
JM/R/H.longAFTWB.R
JM/R/coef.jointModel.R
JM/R/log.posterior.b2.R
JM/R/print.dynCJM.R
JM/R/S.b.R
JM/R/piecewisePHGH.fit.R
JM/R/vcov.jointModel.R
JM/R/fixef.jointModel.R
JM/R/gr.survSplinePH.R
JM/R/LogLik.phGH.R
JM/R/makepredictcall.ins.R
JM/R/opt.longPH.R
JM/R/weibullPHGH.fit.R
JM/R/LogLik.weibullGH.R
JM/R/gr.survPH.R
JM/R/dmvt.R
JM/R/splinePHGH.fit.R
JM/R/Score.weibullAFTGH.R
JM/R/ModelMats.R
JM/R/print.summary.weibull.frailty.R
JM/R/LogLik.weibullAFTGH.R
JM/R/vcov.flexCPH.R
JM/R/coef.weibull.frailty.R
JM/R/initial.surv.R
JM/R/survfitJM.R
JM/R/aucJM.coxph.R
JM/R/initial.survOld.R
JM/R/logLik.jointModel.R
JM/R/piecewiseAFTGH.fit.R
JM/R/coef.flexCPH.R
JM/R/H.longWB.R
JM/R/xtable.jointModel.R
JM/R/makepredictcall.dns.R
JM/R/print.flexCPH.R
JM/R/gr.longAFTWB.R
JM/R/H.longSplinePH.R
JM/R/print.summary.flexCPH.R
JM/R/Score.piecewiseGH.R
JM/R/HessLongPH.R
JM/R/print.aov.jointModel.R
JM/R/print.weibull.frailty.R
JM/R/prederrJM.coxph.R
JM/R/weibull.frailty.R
JM/R/MI.fixed.times.R
JM/R/LogLik.piecewiseGH.R
JM/R/opt.longWB.R
JM/R/Score.splineGH.R
JM/R/print.wald.strata.R
JM/R/print.jointModel.R
JM/R/simulateJM.R
JM/R/print.aucJM.R
JM/R/opt.survPH.R
JM/R/globals.R
JM/R/survfitJM.jointModel.R
JM/R/aucJM.R
JM/R/plot.rocJM.R
JM/R/logLik.flexCPH.R
JM/R/update.logLik.Laplace.R
JM/R/fitted.jointModel.R
JM/R/vcov.weibull.frailty.R
JM/R/gaussKronrod.R
JM/R/print.rocJM.R
JM/R/plot.jointModel.R
JM/R/dmvnorm.R
JM/R/prederrJM.R
JM/R/gr.survAFTWB.R
JM/R/opt.longSplinePH.R
JM/R/piecewiseExp.ph.R
JM/R/prederrJM.jointModel.R
JM/R/posterior.b.R
JM/R/plot.flexCPH.R
JM/R/LogLik.splineGH.R
JM/R/fd.vec.R
JM/R/fn.R
JM/R/opt.longPC.R
JM/R/dynCJM.jointModel.R
JM/R/jacobian2.R
JM/R/gauher.R
JM/R/opt.survWB.R
JM/R/HessSurvPH.R
JM/R/dataLM.R
JM/R/weibullAFTGH.fit.R
JM/R/ins.R
JM/R/summary.jointModel.R
JM/R/dynCJM.R
JM/R/H.longPC.R
JM/R/flexCPH.R
JM/R/coef.summary.jointModel.R
JM/R/Score.phGH.R
JM/R/gr.survWB.R
JM/R/gr.R
JM/R/chol.transf.R
JM/R/cumHaz.R
JM/R/makepredictcall.ibs.R
JM/R/log.posterior.b.R
JM/R/opt.survAFTWB.R
JM/R/gr.longSplinePH.R
JM/R/print.summary.jointModel.R
JM/R/nearPD.R
JM/R/Score.weibullGH.R
JM/R/MI.random.times.R
JM/R/summary.weibull.frailty.R
JM/R/gr.survPC.R
JM/R/opt.longAFTWB.R
JM/R/residuals.jointModel.R
JM/R/gr.longPH.R
JM/R/opt.survPC.R
JM/R/print.prederrJM.R
JM/R/cd.vec.R
JM/R/dns.R
JM/R/predict.b.R
JM/R/summary.flexCPH.R
JM/R/opt.survSplinePH.R
JM/R/deriv.D.R
JM/R/confint.jointModel.R
JM/R/ibs.R
JM/R/plot.survfitJM.R
JM/R/cd.R
JM/R/phGH.fit.R
JM/R/logLik.weibull.frailty.R
JM/R/crLong.R
JM/R/flexCPH.fit.R
JM/R/dropAttr.R
JM/R/weibull.frailty.fit.R
JM/R/simulate.jointModel.R
JM/R/print.survfitJM.R
JM/R/rmvt.R
JM/R/format.perc2.R
JM/R/dbs.R
JM/MD5
JM/DESCRIPTION
JM/man
JM/man/summary.weibull.frailty.Rd
JM/man/anova.Rd
JM/man/simulate.Rd
JM/man/residuals.Rd
JM/man/prothro.Rd
JM/man/ranef.Rd
JM/man/survfitJM.Rd
JM/man/weibull.frailty.Rd
JM/man/aids.Rd
JM/man/wald.strata.Rd
JM/man/predict.Rd
JM/man/JM.Rd
JM/man/DerivIntSplines.Rd
JM/man/plot-rocJM.Rd
JM/man/aucJM.Rd
JM/man/plot-survfitJM.Rd
JM/man/prederrJM.Rd
JM/man/crLong.Rd
JM/man/dynCJM.Rd
JM/man/fitted.Rd
JM/man/jointModelObject.Rd
JM/man/pbc.Rd
JM/man/rocJM.Rd
JM/man/plot.Rd
JM/man/jointModel.Rd
JM/man/piecewiseExp.ph.Rd
JM/man/xtable.Rd
JM/man/coef.Rd