test.function: Score Tests for kernel part in kernel semi parametric model

Description Usage Arguments Value Author(s) References

Description

Perform score tests for kernel part in kernel semi parametric model

Usage

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test.1.kernel(object)

test.global.kernel(object)

test.k.kernel(object, kernel.name)

Arguments

object

an object of class "kspm"

kernel.name

vector of character listing names of kernels for which test should be performed

Value

p values

Author(s)

Catherine Schramm, Aurelie Labbe, Celia Greenwood

References

Schweiger, Regev, et al. "RL SKAT: an exact and efficient score test for heritability and set tests." Genetics (2017): genetics 300395.

Li, Shaoyu, and Yuehua Cui. "Gene centric gene gene interaction: A model based kernel machine method." The Annals of Applied Statistics 6.3 (2012): 1134:1161.

Oualkacha, Karim, et al. "Adjusted sequence kernel association test for rare variants controlling for cryptic and family relatedness." Genetic epidemiology 37.4 (2013): 366:376.

Ge, Tian, et al. "A kernel machine method for detecting effects of interaction between multidimensional variable sets: An imaging genetics application." Neuroimage 109 (2015): 505:514.


KSPM documentation built on Aug. 10, 2020, 5:07 p.m.