test.function: Score Tests for kernel part in kernel semi parametric model
In KSPM: Kernel Semi-Parametric Models
Description
Usage
Arguments
Value
Author(s)
References
Description
Perform score tests for kernel part in kernel semi parametric model
Usage
1
2
3
4
5
test.1.kernel(object)
test.global.kernel(object)
test.k.kernel(object, kernel.name)
Arguments
object
an object of class "kspm"
kernel.name
vector of character listing names of kernels for which test should be performed
Value
p values
Author(s)
Catherine Schramm, Aurelie Labbe, Celia Greenwood
References
Schweiger, Regev, et al. "RL SKAT: an exact and efficient score test for heritability and set tests." Genetics (2017): genetics 300395.
Li, Shaoyu, and Yuehua Cui. "Gene centric gene gene interaction: A model based kernel machine method." The Annals of Applied Statistics 6.3 (2012): 1134:1161.
Oualkacha, Karim, et al. "Adjusted sequence kernel association test for rare variants controlling for cryptic and family relatedness." Genetic epidemiology 37.4 (2013): 366:376.
Ge, Tian, et al. "A kernel machine method for detecting effects of interaction between multidimensional variable sets: An imaging genetics application." Neuroimage 109 (2015): 505:514.
KSPM documentation built on Aug. 10, 2020, 5:07 p.m.
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Description Usage Arguments Value Author(s) References
Description
Perform score tests for kernel part in kernel semi parametric model
Usage
1 2 3 4 5 | test.1.kernel(object)
test.global.kernel(object)
test.k.kernel(object, kernel.name)
|
Arguments
object |
an object of class "kspm" |
kernel.name |
vector of character listing names of kernels for which test should be performed |
Value
p values
Author(s)
Catherine Schramm, Aurelie Labbe, Celia Greenwood
References
Schweiger, Regev, et al. "RL SKAT: an exact and efficient score test for heritability and set tests." Genetics (2017): genetics 300395.
Li, Shaoyu, and Yuehua Cui. "Gene centric gene gene interaction: A model based kernel machine method." The Annals of Applied Statistics 6.3 (2012): 1134:1161.
Oualkacha, Karim, et al. "Adjusted sequence kernel association test for rare variants controlling for cryptic and family relatedness." Genetic epidemiology 37.4 (2013): 366:376.
Ge, Tian, et al. "A kernel machine method for detecting effects of interaction between multidimensional variable sets: An imaging genetics application." Neuroimage 109 (2015): 505:514.
R Package Documentation
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