Files in KinformR
Relationship-Informed Pedigree and Variant Scoring
MD5
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/encoding.R
R/relatedness.R
R/io.R
R/pedigree.r
inst/doc/KinformR-variant_scoring.Rmd
inst/doc/KinformR-penetrance_and_ibd.Rmd
inst/doc/KinformR-variant_scoring.R
inst/doc/KinformR-variant_scoring.pdf
inst/doc/KinformR-penetrance_and_ibd.R
inst/doc/KinformR-penetrance_and_ibd.pdf
inst/extdata/example_pedigree_encoding2.tsv
inst/extdata/1234_ex2.tsv
inst/extdata/example_pedigree_encoding.tsv
inst/extdata/5678_ex1.tsv
inst/extdata/1234_ex2.mat
inst/extdata/5432_ex1.mat
inst/extdata/9876_ex1.tsv
inst/extdata/example_pedigree_encoding3.tsv
inst/extdata/5678_ex1.mat
inst/extdata/example_vcf_extract_5678.tsv
inst/extdata/5432_ex1.tsv
inst/extdata/example_vcf_extract_9876.tsv
inst/extdata/9876_ex1.mat
build/vignette.rds
tests/testthat.R
tests/testthat/test_single_fam_full_workflow.r
tests/testthat/test_pedigree_eval.R
tests/testthat/test_multi_fam_full_workflow.r
tests/testthat/test_encoding.R
tests/testthat/test_io.r
tests/testthat/test_relatedness.R
vignettes/KinformR-variant_scoring.Rmd
vignettes/KinformR-penetrance_and_ibd.Rmd
man/penetrance.Rd
man/ibd.Rd
man/assign.a.Rd
man/read.pedigree.Rd
man/build.relation.dict.Rd
man/read.indiv.Rd
man/score.Rd
man/assign.u.Rd
man/add.fam.scores.Rd
man/read.var.table.Rd
man/subset.mat.Rd
man/encode.rows.Rd
man/assign.status.Rd
man/score.fam.Rd
man/score.pedigree.Rd
man/calc.rv.score.Rd
man/read.relation.mat.Rd
man/score.variant.status.Rd
