The package provides a set of functions which aim is to propose four measures of linkage disequilibrium: the usual r^2 measure, the r^2_S measure (r^2 corrected by the structure sample), the r^2_V (r^2 corrected by the relatedness of genotyped individuals), the r^2_VS measure (r^2 corrected by both the relatedness of genotyped individuals and the structure of the sample).

Author | David Desrousseaux, Florian Sandron, Aurelie Siberchicot, Christine Cierco-Ayrolles and Brigitte Mangin |

Date of publication | 2013-07-04 16:55:36 |

Maintainer | Brigitte Mangin <Brigitte.Mangin@toulouse.inra.fr> |

License | GPL (>= 2) |

Version | 1.3.1 |

LDcorSV

LDcorSV/MD5

LDcorSV/man

LDcorSV/man/data.test.Rd
LDcorSV/man/Measure.R2VS.Rd
LDcorSV/man/Measure.R2V.Rd
LDcorSV/man/Measure.R2S.Rd
LDcorSV/man/Measure.R2.Rd
LDcorSV/man/LDcorSV-package.Rd
LDcorSV/man/LD.Measures.Rd
LDcorSV/man/Inv.proj.matrix.sdp.Rd
LDcorSV/man/Info.Locus.Rd
LDcorSV/data

LDcorSV/data/data.test.rda

LDcorSV/R

LDcorSV/R/Measure.R2VS.R
LDcorSV/R/Measure.R2V.R
LDcorSV/R/Measure.R2S.R
LDcorSV/R/Measure.R2.R
LDcorSV/R/LD.Measures.R
LDcorSV/R/Inv.proj.matrix.sdp.R
LDcorSV/R/Info.Locus.R
LDcorSV/NAMESPACE

LDcorSV/DESCRIPTION

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