CEUSNP | Example data set for LDheatmap |
CHBJPTSNP | Example data set for LDHeatmap |
GIMAP5 | Example data set for LDHeatmap |
GIMAP5.CEU | Example data set for LDheatmap |
LDheatmap | This function produces a pairwise LD plot. |
LDheatmap.addGenes | Add gene plot to an LDheatmap object. |
LDheatmap.addGrob | Add a graphical object to an LDheatmap plot |
LDheatmap.addRecombRate | Add recombination rate plot to an LD heat map. |
LDheatmap.addScatterplot | Add a scatter plot to an LDheatmap object |
LDheatmap.highlight | Highlight a genetic region in the linkage disequilibrium heat... |
LDheatmap-internal | Internal LDheatmap functions and data files |
LDheatmap.marks | Plots a symbol in the centers of cells of the heat map image |
plotGenes | Plot genes from a specified region of the human genome. |
recombRate | Produce recombination rate plot. |
vcfR2SnpMatrix | Extract genotype information from a vcfR object |
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