pvalObjectsCore: Compute the p-value of overlap for two or three objects

In LISTO: Performing Comprehensive Overlap Assessments

Compute the p-value of overlap for two or three objects

Description

This function computes the p-value of overlap for two or three objects.

Usage

pvalObjectsCore(
  obj1,
  obj2,
  obj3 = NULL,
  universe1,
  universe2 = NULL,
  numCol = NULL,
  cutoff = NULL,
  compFun = `>`,
  type = c("2N", "2MN", "3N")
)

Arguments

obj1	A data frame with a numeric column, or a character vector.
obj2	A data frame with a numeric column, or a character vector.
obj3	A data frame with a numeric column, or a character vector.
universe1	The set from which the items stored in obj1 are selected.
universe2	The set from which the items stored in obj2 are selected.
numCol	The name of the numeric column used for data frame ordering.

Value

A p-value.

LISTO documentation built on April 25, 2026, 5:06 p.m.