API for LMMsolver
Linear Mixed Models with Sparse Matrix Methods and Smoothing
| Global functions | |
|---|---|
| .onUnload | Source code |
| .spectralHeritability | Source code |
| ADchol | Source code |
| APSIMdat | Man page |
| Bsplines | Man page Source code |
| ED_corrections | Source code |
| GetIntVector | Source code |
| GramMatrix | Source code |
| Gram_analytic | Source code |
| GrevillePoints | Source code |
| Jacobian | Source code |
| LMMsolve | Man page Source code |
| LMMsolveObject | Man page Source code |
| LMMsolver | Man page |
| LMMsolver-package | Man page |
| MatrixProduct | Source code |
| PrecisionMatrix_lifting | Source code |
| PsplinesKnots | Man page Source code |
| RowKron | Source code |
| RowKronecker | Man page Source code |
| SeaSurfaceTemp | Man page |
| SparseCholesky | Source code |
| as.ginverse | Man page Source code |
| barley.uniformity.trial | Man page |
| basis | Source code |
| bernstein | Source code |
| bernstein_gram_coef | Source code |
| bernstein_matrix | Source code |
| build_random_Z1_pred | Source code |
| build_random_Z1_train | Source code |
| build_restriction_matrix | Source code |
| cDiff | Source code |
| calcMarsden | Source code |
| calcNomEffDim | Source code |
| calcScaleFactor | Source code |
| calcSigma | Source code |
| calcStandardErrors | Man page Source code |
| calcSumSquares | Source code |
| cf | Source code |
| checkConditionalFactor | Source code |
| checkFormVars | Source code |
| checkGinverseAgainstData | Source code |
| checkGroup | Source code |
| checkLim | Source code |
| checkMultiResponse | Source code |
| check_new_levels | Source code |
| check_required_vars | Source code |
| chkInputLMMsolve | Source code |
| chkResponse | Source code |
| chkSplinesFormula | Source code |
| chkValBsplines | Source code |
| coef.LMMsolve | Man page Source code |
| compute_alpha_active | Source code |
| condFactor | Source code |
| constructCCt | Source code |
| constructFixed_pred | Source code |
| constructFixed_train | Source code |
| constructG | Source code |
| constructGinv | Source code |
| constructGinvSplines | Source code |
| constructPenalty | Source code |
| constructRandom | Source code |
| constructRinv | Man page Source code |
| cross3 | Source code |
| designMatrixPredSplines | Source code |
| deviance.LMMsolve | Man page Source code |
| diagXCinvXt | Source code |
| diagnosticsMME | Man page Source code |
| displayMME | Man page Source code |
| dlogdet | Source code |
| dlogdet.ADchol | Source code |
| dlogdet.LMMsolver.chol | Source code |
| dlogdetLinear | Source code |
| effDim | Man page Source code |
| eta_to_xi | Source code |
| eval_basis | Source code |
| expandGinv | Source code |
| extSpamMatrix | Source code |
| extend_coef | Source code |
| fill_missing_vars | Source code |
| fitLMM | Source code |
| fitted.LMMsolve | Man page Source code |
| fixedpartCircle | Source code |
| getHeritability | Man page Source code |
| getWeights | Source code |
| get_missing_vars | Source code |
| glogit | Source code |
| grp | Source code |
| integrate_bspline | Source code |
| integrate_x_bspline | Source code |
| inv_glogit | Source code |
| linearSum | Source code |
| logLik.LMMsolve | Man page Source code |
| logLikelihood_aux | Source code |
| logdet | Source code |
| logdet_Rcpp_fun | Source code |
| logdet_correction | Source code |
| mLogLik | Man page Source code |
| makeGrid | Man page Source code |
| mat2vec | Source code |
| multinomial | Man page Source code |
| multinomial.deviance.residuals | Source code |
| multipop | Man page |
| nameCoefs | Source code |
| normVec | Source code |
| oats.data | Man page |
| obtainSmoothTrend | Man page Source code |
| orthoModel | Source code |
| ortho_diff_matrix | Source code |
| ortho_int_condition | Source code |
| ortho_x_diff_matrix | Source code |
| ortho_x_int_condition | Source code |
| predict.LMMsolve | Man page Source code |
| predict_marginal | Source code |
| print.summary.LMMsolve | Man page Source code |
| quadForm | Source code |
| removeIntercept | Source code |
| residuals.LMMsolve | Man page Source code |
| rotate_theta | Source code |
| solve_Rcpp_fun | Source code |
| sparseMixedModels | Source code |
| spl1D | Man page Source code |
| spl2D | Man page Source code |
| spl3D | Man page Source code |
| summary.LMMsolve | Man page Source code |
| theta_to_xi | Source code |
| updateLinear | Source code |
| update_Rcpp_fun | Source code |
| vec | Source code |
| vec2mat | Source code |
| vecList | Source code |
| x_logx | Source code |
| xi_to_eta | Source code |
| xi_to_theta | Source code |
