Files in LMMsolver
Linear Mixed Models with Sparse Matrix Methods and Smoothing
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/LMMsolve.R
R/multinomial.R
R/makeGrid.R
R/chkInputLMMsolve.R
R/ginverse.R
R/spl3D.R
R/diagnosticsMME.R
R/constructGinv.R
R/ConditionalFactor.R
R/displayMME.R
R/data.R
R/predictFunctions.R
R/orthoModel.R
R/chkSplinesFormula.R
R/spl2D.R
R/LMMsolve-class.R
R/LMMsolver.R
R/constructRinv.R
R/mLogLik.R
R/chkResponse.R
R/getWeights.R
R/spl1D.R
R/DifferentiationCholesky.R
R/getHeritability.R
R/constructFixed.R
R/effDim.R
R/constructRandom.R
R/sparseMixedModels.R
R/zzz.R
R/splinesFunctions.R
R/HarvilleODE.R
R/orthoBsplines.R
R/utils.R
R/obtainSmoothTrend.R
R/fitLMM.R
src/Makevars.win
src/SparseMatrix.h
src/SparseMatrix.cpp
src/RcppExports.cpp
src/ADcholesky.cpp
src/AuxFun.h
src/ADcholesky.h
src/LMMsolver_chol.cpp
src/AuxFun.cpp
src/Makevars.in
src/cholesky.cpp
src/cholesky.h
inst/CITATION
inst/doc/Solving_Linear_Mixed_Models.html
inst/doc/Solving_Linear_Mixed_Models.Rmd
inst/doc/Solving_Linear_Mixed_Models.R
inst/tinytest/binomial2
inst/tinytest/binomial1
inst/tinytest/test_obtainSmoothTrend.R
inst/tinytest/LMMsolve4
inst/tinytest/LMMsolve3
inst/tinytest/GLMMFull
inst/tinytest/LMMsolve2
inst/tinytest/spl2DFull2
inst/tinytest/pred5
inst/tinytest/pred7
inst/tinytest/test_LMMsolver_chol.R
inst/tinytest/test_HarvilleODE.R
inst/tinytest/pred10
inst/tinytest/pred6
inst/tinytest/test_spl3D.R
inst/tinytest/pred8
inst/tinytest/spl2DFull
inst/tinytest/spl3DFull2
inst/tinytest/ortho_fit1
inst/tinytest/varComps
inst/tinytest/effDim0
inst/tinytest/modCoefsSe
inst/tinytest/multinomial1
inst/tinytest/test_offset.R
inst/tinytest/mLogLik0
inst/tinytest/modResid
inst/tinytest/modFit
inst/tinytest/test_ginverse.R
inst/tinytest/LMMsolve0
inst/tinytest/test_internal_functions.R
inst/tinytest/binomial3
inst/tinytest/LMMsolve5
inst/tinytest/pred1
inst/tinytest/LMMsolve1
inst/tinytest/smooth3D2
inst/tinytest/modCoefs
inst/tinytest/test_effDim.R
inst/tinytest/spl3DFull
inst/tinytest/test_conditionalFactor.R
inst/tinytest/test_binomial.R
inst/tinytest/test_predict.R
inst/tinytest/test_getHeritability.R
inst/tinytest/ortho_fit2
inst/tinytest/test_LMMsolve-class.R
inst/tinytest/gam1DFull
inst/tinytest/smooth3D1
inst/tinytest/pred4
inst/tinytest/test_spl2D.R
inst/tinytest/test_orthoBsplines.R
inst/tinytest/spl2DFull3
inst/tinytest/test_orthoModel.R
inst/tinytest/test_LMMsolve.R
inst/tinytest/test_mLogLik.R
inst/tinytest/pred9
inst/tinytest/pred2
inst/tinytest/pred3
inst/tinytest/spl3DFull3
inst/tinytest/test_spl1D.R
inst/tinytest/test_GLMM.R
inst/tinytest/spl1DFull
inst/tinytest/test_MME_functions.R
inst/tinytest/effDims
inst/tinytest/test_gam.R
inst/tinytest/testdata.rda
inst/tinytest/cfFull
inst/tinytest/test_multinomial.R
build/vignette.rds
build/partial.rdb
tests/tinytest.R
vignettes/bibliography.bib
vignettes/Solving_Linear_Mixed_Models.Rmd
data/multipop.rda
data/barley.uniformity.trial.rda
data/oats.data.rda
data/APSIMdat.rda
data/SeaSurfaceTemp.rda
man/coef.LMMsolve.Rd
man/diagnosticsMME.Rd
man/multinomial.Rd
man/RowKronecker.Rd
man/Bsplines.Rd
man/mLogLik.Rd
man/constructRinv.Rd
man/effDim.Rd
man/LMMsolve.Rd
man/oats.data.Rd
man/deviance.LMMsolve.Rd
man/LMMsolveObject.Rd
man/makeGrid.Rd
man/logLik.LMMsolve.Rd
man/LMMsolver.Rd
man/residuals.LMMsolve.Rd
man/summary.LMMsolve.Rd
man/obtainSmoothTrend.Rd
man/calcStandardErrors.Rd
man/predict.LMMsolve.Rd
man/multipop.Rd
man/spl1D.Rd
man/getHeritability.Rd
man/APSIMdat.Rd
man/SeaSurfaceTemp.Rd
man/PsplinesKnots.Rd
man/as.ginverse.Rd
man/displayMME.Rd
man/fitted.LMMsolve.Rd
man/barley.uniformity.trial.Rd
man/figures/README-Plot_USprecip-1.png
man/figures/logo.png
