LOPART_interface: Labeled Optimal Partitioning interface

In LOPART: Labeled Optimal Partitioning

Labeled Optimal Partitioning interface

Description

Low-level interface to LOPART C code

Usage

LOPART_interface(
  input_data,
  input_label_start,
  input_label_end,
  input_label_changes,
  n_updates,
  penalty_unlabeled,
  penalty_labeled = 0
)

Arguments

input_data	numeric vector of N data to segment
input_label_start	integer vector of label start positions in 0, ..., N-2
input_label_end	integer vector of label end positions in 1, ..., N-1
input_label_changes	integer vector of 0/1, number of labeled changes
n_updates	number of dynamic programming updates to perform, usually should be number of input_data N, but can be less if you want to analyze/plot the cost/candidates at previous data.
penalty_unlabeled	non-negative numeric scalar (bigger for fewer changes in unlabeled regions, smaller for more changes)
penalty_labeled	non-negative numeric scalar (penalty for each change in a positive label).

Details

Avoid using this function and instead use the LOPART function.

Value

data frame with four columns: cost_candidates is the cost of each last segment start considered (from 1 to N) for the computation of the optimal cost up to the last data point (Inf means infeasible); cost_optimal is the optimal cost vector computed using dynamic programming; mean is the last segment mean of the optimal model ending at that data point; last_change is the optimal changepoints (negative numbers are not used).

Author(s)

Toby Dylan Hocking

LOPART documentation built on June 22, 2024, 9:54 a.m.