LSPFP: Lysate and Secretome Peptide Feature Plotter

Share:

Creates plots of peptides from shotgun proteomics analysis of secretome and lysate samples. These plots contain associated protein features and scores for potential secretion and truncation.

Author
Rafael Dellen, with contributions of Fabian Kruse
Date of publication
2016-05-19 16:35:29
Maintainer
Rafael Dellen <Rafael.Dellen@uni-duesseldorf.de>
License
GPL-3
Version
1.0.0

View on CRAN

Man pages

LSPFP-internal
\Sexpr[results=rd,stage=build]{tools:::Rd_package_title("LSPFP")}
LSPFP-package
\Sexpr[results=rd,stage=build]{tools:::Rd_package_title("LSPFP")}
printSelectedPeptides
Only print peptides
wrapperLSPFP
wrapperLSPFP

Files in this package

LSPFP
LSPFP/inst
LSPFP/inst/extdata
LSPFP/inst/extdata/Mouse.txt
LSPFP/NAMESPACE
LSPFP/R
LSPFP/R/score_funct_lspfp.R
LSPFP/R/gffxtract_lspfp.R
LSPFP/R/experiment_funct_lspfp.R
LSPFP/R/print_lspfp.R
LSPFP/R/general_funct_lspfp.R
LSPFP/R/wrapper_lspfp.R
LSPFP/R/feature_funct_lspfp.R
LSPFP/R/filter_lspfp.R
LSPFP/R/math_lspfp.R
LSPFP/R/openData_funct_lspfp.R
LSPFP/R/download_funct_lspfp.R
LSPFP/MD5
LSPFP/build
LSPFP/build/partial.rdb
LSPFP/DESCRIPTION
LSPFP/man
LSPFP/man/LSPFP-package.Rd
LSPFP/man/printSelectedPeptides.Rd
LSPFP/man/LSPFP-internal.Rd
LSPFP/man/wrapperLSPFP.Rd