A collection of tools for the calculation of freewater metabolism.
|Author||Luke Winslow, Jake Zwart, Ryan Batt, Jessica Corman, Hilary Dugan, Paul Hanson, Aline Jaimes, Jordan Read, Richard Woolway|
|Date of publication||2016-06-23 19:57:42|
|Maintainer||Luke Winslow <email@example.com>|
|License||GPL (>= 2)|
calc.lw.net: Estimate net long wave heat radiation
calc.zeng: Estimate sensible and latent heat fluxes
getSchmidt: Returns Schmidt number for a specific gas at a given...
get.Ts: gets surface water temperatures
get.vars: subsets data.frame according to header names
has.vars: tests data.frame for column names
is.day: determines if measurement was taken during the daytime
is.night: determines if measurement was taken during the night
k600.2.kGAS: Returns the gas exchange velocity for gas of interest w/ no...
k.read: Returns a timeseries of gas exchange velocity
k.read.base: Returns a timeseries of gas exchange velocity
load.all.data: Attemps to load and merge all timeseries data for a given...
load.meta: Loads a metadata file from the specified path
metab: Calculate metabolism
metab.bayesian: Metabolism model based on a bayesian parameter estimation...
metab.bookkeep: Metabolism model based on simple day/night summation...
metab.kalman: Metabolism calculated from parameters estimated using a...
metab.mle: Metabolism calculated from the maximum likelihood estimates...
metab.ols: Metabolism model based on a ordinary least squares parameter...
o2.at.sat: Calculates the equilibrium saturation concentration of oxygen...
par.to.sw: Convert PAR to shortwave
rmv.vars: subsets data.frame according to header names
sun.rise.set: Calculates the time of sunrise and sunset
sw.to.par: Convert shortwave radiation to PAR
temp.kalman: Smooth temperature time series using a Kalman filter/...
var.indx: finds matching column names in data.frame
watts.in: Simple estimate of energy gained by a layer of water
wind.scale: Wind Scaling U10 - exponential conversion to 10m wind speed