A collection of tools for the calculation of freewater metabolism from in situ time series of dissolved oxygen, water temperature, and, optionally, additional environmental variables. LakeMetabolizer implements 5 different metabolism models with diverse statistical underpinnings: bookkeeping, ordinary least squares, maximum likelihood, Kalman filter, and Bayesian. Each of these 5 metabolism models can be combined with 1 of 7 models for computing the coefficient of gas exchange across the air–water interface (k). LakeMetabolizer also features a variety of supporting functions that compute conversions and implement calculations commonly applied to raw data prior to estimating metabolism (e.g., oxygen saturation and optical conversion models).
|Author||Luke Winslow [aut], Jake Zwart [cre, aut] (<https://orcid.org/0000-0002-3870-405X>), Ryan Batt [aut], Jessica Corman [aut], Hilary Dugan [aut], Paul Hanson [aut], Aline Jaimes [aut], Jordan Read [aut], Richard Woolway [aut]|
|Maintainer||Jake Zwart <firstname.lastname@example.org>|
|License||GPL (>= 2)|
|Package repository||View on CRAN|
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