LncFinder: LncRNA Identification and Analysis Using Heterologous Features

Long non-coding RNAs identification and analysis. Default models are trained with human, mouse and wheat datasets by employing SVM. Features are based on intrinsic composition of sequence, EIIP value (electron-ion interaction pseudopotential), and secondary structure. This package can also extract other classic features and build new classifiers. Reference: Han SY., Liang YC., Li Y., et al. (2018) <doi:10.1093/bib/bby065>.

Getting started

Package details

AuthorSiyu HAN [aut, cre], Ying LI [aut], Yanchun LIANG [aut]
MaintainerSiyu HAN <[email protected]>
LicenseGPL-3
Version1.1.3
URL http://csbl.bmb.uga.edu/mirrors/JLU/lncfinder/ http://bmbl.sdstate.edu/lncfinder/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("LncFinder")

Try the LncFinder package in your browser

Any scripts or data that you put into this service are public.

LncFinder documentation built on Aug. 3, 2018, 5:04 p.m.