Description Usage Arguments Value Author(s) Examples

View source: R/affinityMatrix.R

calculate the affinity matrix from the diff matrix with 20 neighbors

1 | ```
affinityMatrix(Diff, K = 20, sigma = 0.5)
``` |

`Diff` |
A diff matrix |

`K` |
The number of neighbors in consideration |

`sigma` |
A parameter to determine the scale |

W The similarity matrix

Xiaoyao Yin

1 2 3 | ```
data_list <- simu_data_gen()
Diff <- dist2eu(Standard_Normalization(data_list[[1]]),Standard_Normalization(data_list[[1]]))
simi <- affinityMatrix(Diff,20,0.5)
``` |

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.