CalculatePrincipalCoordinates: Show Principal Components Breakdown
In MAGNAMWAR: A Pipeline for Meta-Genome Wide Association
Description
Usage
Arguments
Value
Examples
View source: R/CalculatePrincipalCoordinates.R
Description
Function to show Principal Components statistics based on the OrthoMCL presence absence groupings.
Usage
1
CalculatePrincipalCoordinates(mcl_data)
Arguments
mcl_data
output of FormatAfterOrtho –list of 2 things– 1: binary matrix indicating the presence / absence of genes in each OG and 2: vector of names of OGs
Value
returns a named list of principal components and accompanying proportion of variance for each
Examples
1
MAGNAMWAR documentation built on May 2, 2019, 6:42 a.m.
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Description Usage Arguments Value Examples
View source: R/CalculatePrincipalCoordinates.R
Description
Function to show Principal Components statistics based on the OrthoMCL presence absence groupings.
Usage
1 | CalculatePrincipalCoordinates(mcl_data)
|
Arguments
mcl_data |
output of FormatAfterOrtho –list of 2 things– 1: binary matrix indicating the presence / absence of genes in each OG and 2: vector of names of OGs |
Value
returns a named list of principal components and accompanying proportion of variance for each
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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