Man pages for MARSS
Multivariate Autoregressive State-Space Modeling

accuracy_marssMLEReturn accuracy metrics
allowedMARSS Function Defaults and Allowed Methods
as_marssMODELConvert Model Objects between Forms
checkMARSSInputsCheck inputs to MARSS call
checkModelListCheck model List Passed into MARSS Call
coef_marssMLECoefficient function for MARSS MLE objects
CSEGriskfigurePlot Extinction Risk Metrics
CSEGtmufigurePlot Forecast Uncertainty
datasetsExample Data Sets
describe_marssMODELDescribe a marssMODEL Objects
fitted_marssMLEReturn fitted values for X(t) and Y(t) in a MARSS model
forecast_marssMLEforecast function for marssMLE objects
glance_marssMLEReturn brief summary information on a MARSS fit
graywhalesPopulation Data Sets
harborSealHarbor Seal Population Count Data (Log counts)
isleRoyalIsle Royale Wolf and Moose Data
is_marssMLETests marssMLE object for completeness
is_marssMODELTest Model Objects
ldiagReturn a diagonal list matrix
loggerheadLoggerhead Turtle Tracking Data
logLik_marssMLElogLik method for MARSS MLE objects
MARSSFit a MARSS Model via Maximum-Likelihood Estimation
MARSSaicAIC for MARSS Models
MARSSapplynamesNames for marssMLE Object Components
MARSSbootBootstrap MARSS Parameter Estimates
MARSScvMARSScv is a wrapper for MARSS that re-fits the model with...
MARSS_dfaMultivariate Dynamic Factor Analysis
MARSSFisherIObserved Fisher Information Matrix at the MLE
MARSSfitGeneric for fitting MARSS models
MARSSharveyobsFIHessian Matrix via the Harvey (1989) Recursion
MARSShatytCompute Expected Value of Y, YY, and YX
MARSShessianParameter Variance-Covariance Matrix from the Hessian Matrix
MARSShessian_numericalHessian Matrix via Numerical Approximation
MARSSinfoMARSS Error Messages and Warnings
MARSSinitsInitial Values for MLE
MARSSinnovationsbootBootstrapped Data using Stoffer and Wall's Algorithm
MARSSkemEM Algorithm function for MARSS models
MARSSkemcheckModel Checking for MLE objects Passed to MARSSkem
MARSSkfKalman Filtering and Smoothing
MARSS_marssMultivariate AR-1 State-space Model
MARSS_marxssMultivariate AR-1 State-space Model with Inputs
marssMLE-classClass "marssMLE"
marssMODEL-classClass "marssMODEL"
MARSSoptimParameter estimation for MARSS models using optim
MARSS-packageMultivariate Autoregressive State-Space Model Estimation
MARSSparamCIsStandard Errors, Confidence Intervals and Bias for MARSS...
marssPredict-classClass "marssPredict"
MARSSresidualsMARSS Residuals
marssResiduals-classClass "marssResiduals"
MARSSresiduals_tTMARSS Smoothed Residuals
MARSSresiduals_tt1MARSS One-Step-Ahead Residuals
MARSSresiduals_tttMARSS Contemporaneous Residuals
MARSSsimulateSimulate Data from a MARSS Model
MARSS_vectorizedVectorized Multivariate AR-1 State-space Model
MARSSvectorizeparamVectorize or Replace the par List
match_arg_exactmatch.arg with exact matching
model_frame_marssMODELmodel.frame method for marssMLE and marssMODEL objects
planktonPlankton Data Sets
plot_marssMLEPlot MARSS MLE objects
plot_marssPredictPlot MARSS Forecast and Predict objects
plot_marssResidualsPlot MARSS marssResiduals objects
predict_helppredict and forecast MARSS MLE objects
predict_marssMLEpredict and forecast MARSS MLE objects
print_marssMLEPrinting functions for MARSS MLE objects
print_marssMODELPrinting marssMODEL Objects
print_marssPredictPrinting function for MARSS Predict objects
residuals_marssMLEModel and state fitted values, residuals, and residual sigma
SalmonSurvCUISalmon Survival Indices
stdInnovStandardized Innovations
summary_marssMLESummary methods for marssMLE objects
sysdataPalettes
tidy_marssMLEReturn estimated parameters with summary information
toLatex_marssMLECreate a LaTeX Version of the Model
tsSmooth_marssMLESmoothed and filtered x and y time series
utility_functionsUtility Functions
zscorez-score a vector or matrix
MARSS documentation built on May 29, 2024, 3:34 a.m.