MBI: (M)ultiple-site (B)iodiversity (I)ndices Calculator

Share:

Over 20 multiple-site diversity indices can be calculated. Later versions will include phylogenetic diversity

Author
Youhua Chen
Date of publication
2012-10-20 06:45:03
Maintainer
Youhua Chen <haydi@126.com>
License
GPL-2
Version
1.0

View on CRAN

Man pages

batch.calculation
calculate all diversity indices at the same time
cfull
calculate Baselga's biodiversity index (nestdness+turnover)
cl
calculate Lennon's multiple-site richness index
cn
Calculate Baselga's multiple-site nestedness index
crep
Calculate Carvalho's multiple-site replacement index
crich
Calculate Carvalho's multiple-site richness difference index
ct
Calculate Baselga's multiple-site turnover index
do
Calculate Diserud-Odegaard's index
harrison
Calculate Harrison's dissimilarity index
ht
Calculate Harrison's turnover index
MBI-package
MBI: (M)ultiple-site (B)iodiversity (I)ndices Calculator
mjaccard
Calculate the average of Jaccard pairwise-site dissimilarity...
ml
calculate the average Lennon's pairwise-site richness index
mn
Calculate the average of Baselga's pairwise-site nestedness...
mrep
Calculate the average of Carvalho's pairwise-site replacement...
mrich
Calculate the average of Carvalho's pairwise-site richness...
msorensen
Calculate the average of Sorensen pairwise-site dissimilarity...
mt
Calculate the average of Baselga's pairwise-site turnover...
rarity
Calculate rarity degrees (decided by the argument "percent")...
wbeta
Calculate Whittaker's beta diversity index
wnodf
Calculate Almeida-Neto and Ulrich's nestedness index
wt
Calculate Williams's turnover index

Files in this package

MBI
MBI/MD5
MBI/R
MBI/R/MBI.R
MBI/NAMESPACE
MBI/man
MBI/man/wt.Rd
MBI/man/wnodf.Rd
MBI/man/wbeta.Rd
MBI/man/rarity.Rd
MBI/man/mt.Rd
MBI/man/msorensen.Rd
MBI/man/mrich.Rd
MBI/man/mrep.Rd
MBI/man/mn.Rd
MBI/man/ml.Rd
MBI/man/mjaccard.Rd
MBI/man/MBI-package.Rd
MBI/man/ht.Rd
MBI/man/harrison.Rd
MBI/man/do.Rd
MBI/man/ct.Rd
MBI/man/crich.Rd
MBI/man/crep.Rd
MBI/man/cn.Rd
MBI/man/cl.Rd
MBI/man/cfull.Rd
MBI/man/batch.calculation.Rd
MBI/DESCRIPTION