Man pages for MBNMAtime
Run Time-Course MBNMA Models

add_indexAdd follow-up time and arm indices to a dataset
alog_pcfbStudies of alogliptin for lowering blood glucose...
compound.betaPrepares beta time-course parameters for mb.write()
devplotPlot deviance contributions from an MBNMA model
fitplotPlot fitted values from MBNMA model
genmaxcolsGet large vector of distinct colours using Rcolorbrewer
gen.parameters.to.saveAutomatically generate parameters to save for a dose-response...
get.earliest.timeCreate a dataset with the earliest time point only
getjagsdataPrepares data for JAGS
get.latest.timeCreate a dataset with the latest time point only
get.model.valsGet MBNMA model values
get.priorGet current priors from JAGS model code
goutSUA_CFBStudies of treatments for reducing serum uric acid in...
goutSUA_CFBcombStudies of combined treatments for reducing serum uric acid...
inconsistency.loopsIdentify comparisons in loops that fulfill criteria for...
mb.comparisonsIdentify unique comparisons within a network (identical to...
mb.emaxRun MBNMA model with an Emax time-course function (without a...
mb.emax.hillRun MBNMA model with an Emax time-course function and a Hill...
mb.exponentialRun MBNMA model with an exponential time-course function
mb.fract.firstRun MBNMA model with a first-order fractional polynomial...
mb.fract.secondRun MBNMA model with a second-order fractional polynomial...
mb.linearRun MBNMA model with a linear time-course function
mb.make.contrastConvert arm-based MBNMA data to contrast data
mb.networkCreate an mb.network object
MBNMAtime-packageMBNMAtime for Model-Based Network Meta-Analysis of...
mb.nodesplitPerform node-splitting on a MBNMA time-course network
mb.nodesplit.comparisonsIdentify comparisons in time-course MBNMA datasets that...
mb.piecelinearRun MBNMA model with a piecewise linear time-course function
mb.quadraticRun MBNMA model with a quadratic time-course function
mb.runRun MBNMA time-course models
mb.updateUpdate MBNMA to obtain deviance contributions or fitted...
mb.validate.dataValidates that a dataset fulfills requirements for MBNMA
mb.writeWrite MBNMA time-course models JAGS code
obesityBW_CFBStudies of treatments for reducing body weight in patients...
osteopainStudies of pain relief medications for osteoarthritis
pDcalcCalculate plugin pD from a JAGS model with univariate...
plot.mbnmaForest plot for results from time-course MBNMA models
plot.mb.predictPlots predicted responses from a time-course MBNMA model
plot.mb.rankPlot histograms of rankings from MBNMA models
predict.mbnmaPredict responses over time in a given population based on...
print.mb.networkPrint mb.network information to the console
print.mb.nodesplitPrints basic results from a node-split to the console
print.mb.predictPrint summary information from an mb.predict object
print.mb.rankPrints a summary of rankings for each parameter
radian.rescaleCalculate position of label with respect to vertex location...
rankSet rank as a method
rankaucCalculates ranking probabilities for AUC from a time-course...
rank.mbnmaRank parameters from a time-course MBNMA
ref.comparisonsIdentify unique comparisons relative to study reference...
ref.synthSynthesise single arm studies with repeated observations of...
ref.validateChecks the validity of ref.resp if given as data frame
replace.priorReplace original priors in an MBNMA model with new priors
summary.mbnmaPrint summary MBNMA results to the console
summary.mb.nodesplitTakes node-split results and produces summary data frame
summary.mb.predictPrints summary of mb.predict object
time.funWrite time-course function component of JAGS code for MBNMA...
timeplotPlot raw responses over time by treatment or class
write.alphaAdds sections of JAGS code for an MBNMA model that correspond...
write.betaAdds sections of JAGS code for an MBNMA model that correspond...
write.checkChecks validity of arguments for mb.write
write.corAdds correlation between time-course relative effects
write.fract.polyAdds additional sections of JAGS code for an MBNMA model...
write.insertsWrites insert points for RegEx in MBNMA JAGS code
write.likelihoodAdds sections of JAGS code for an MBNMA model that correspond...
write.modelWrite the basic JAGS model code for MBNMA to which other...
write.piece.fractAdds additional sections of JAGS code for an MBNMA model...
write.piecelinearAdds additional sections of JAGS code for an MBNMA model...
write.ref.synthWrite MBNMA time-course models JAGS code for synthesis of...
write.remove.loopsRemoves any loops from MBNMA model JAGS code that do not...
MBNMAtime documentation built on Oct. 30, 2019, 9:56 a.m.