MDR: Detect gene-gene interactions using multifactor dimensionality reduction
Version 1.2

Performs multifactor dimensionality reduction (MDR) to detect potential gene-gene interactions in case-control studies.

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AuthorStacey Winham
Date of publication2012-03-12 06:05:04
MaintainerStacey Winham <stacey.winham@gmail.com>
LicenseGPL-2
Version1.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("MDR")

Man pages

boot.error: Function to calculate a post-hoc prediction estimate of...
compare: Function for internal use only ...
mdr: Function to perform MDR on a dataset for a given set of loci
mdr1: Sample data for MDR package for n=250, p=25
mdr2: Sample data for MDR package for n=250, p=100
mdr.3WS: A function to perform MDR on a dataset using the three-way...
mdr.ca.adj: Function to calculate a post-hoc adjusted prediction estimate...
mdr.cv: A function to perform MDR on a dataset using k-fold...
mdr.hr: Function to estimate the accuracy of an MDR model given...
MDR-package: Detect gene-gene interactions using multifactor...
permute.mdr: Function to perform a permutation test after fitting an MDR...
plot.mdr: Plotting the results of an MDR model
predict.mdr: MDR model predictions
summary.mdr: Summarizing the results of an MDR model
test: Sample data for MDR package for n=1000, p=5000
train: Sample data for MDR package for n=1000, p=5000

Functions

MDR Man page
MDR-package Man page
boot.error Man page Source code
compare Man page Source code
mdr Man page Source code
mdr.3WS Man page Source code
mdr.ca.adj Man page Source code
mdr.cv Man page Source code
mdr.hr Man page Source code
mdr1 Man page
mdr2 Man page
permute.mdr Man page Source code
plot.mdr Man page Source code
predict.mdr Man page Source code
summary.mdr Man page Source code
test Man page
train Man page

Files

MD5
R
R/mdr.r
NAMESPACE
man
man/train.Rd
man/test.Rd
man/summary.mdr.Rd
man/predict.mdr.Rd
man/plot.mdr.Rd
man/permute.mdr.Rd
man/mdr2.Rd
man/mdr1.Rd
man/mdr.Rd
man/mdr.hr.Rd
man/mdr.cv.Rd
man/mdr.ca.adj.Rd
man/mdr.3WS.Rd
man/MDR-package.Rd
man/compare.Rd
man/boot.error.Rd
LICENCE
DESCRIPTION
data
data/train.txt.gz
data/test.txt.gz
data/mdr2.txt.gz
data/mdr1.txt.gz
data/datalist
COPYING
MDR documentation built on May 19, 2017, 5:13 p.m.