test: Sample data for MDR package for n=1000, p=5000

In MDR: Detect gene-gene interactions using multifactor dimensionality reduction

Description

This dataset provides case/control disease status and genetic information.

Usage

data(test)

Format

A simulated data frame with 1000 observations on 5001 variables. 'Response' is a binary vector representing case(1) or control(0) status for a disease. Variables 'SNP.1' to 'SNP.5000' are numeric variables which represent genotype information (coded as 0,1,2) at 5000 loci.

Details

This data was simulated with a larger number of samples and genetic predictor variables than mdr1 and mdr2 as an example for a larger association study. Can be used as part of a training-testing framework to assess models built with train

See Also

train

Examples

data(test)

Example output

Loading required package: lattice

MDR documentation built on May 29, 2017, 7:05 p.m.