psyfun.boot: Bootstrapping Standard Errors of Psychometric Function...
In MPDiR: Data Sets and Scripts for Modeling Psychophysical Data in R

psyfun.boot

R Documentation

Bootstrapping Standard Errors of Psychometric Function Parameters

Description

A function that will run a bootstrap on the estimated parameters of a psychometric function fit given a model object.

Usage

psyfun.boot(obj, N = 100)

Arguments

`obj`	object inheriting from class ‘glm’ from a fit of a psychometric function
`N`	integer indicating number of bootstrap replications.

Details

The function computes new binomial responses based on the fitted probabilities of the model object for each bootstrap replication. A psychometric function is then fit to each one and the fitted coefficients returned as a bootstrap replicate.

Value

Returns a matrix with one row for each coefficient of the model and one column for each bootstrap replication.

Author(s)

Kenneth Knoblauch

References

Maloney, L. T. (1990) Confidence interval for the parameters of psychometric functions. Perception & Psychophysics, 47(2), 127–134.

Foster, D.H., Bischof, W.F.(1997) Bootstrap estimates of the statistical accuracy of thresholds obtained from psychometric functions. Spatial Vision, 11(1), 135–139.

Treutwein, B., Strasburger, H. (1999) Fitting the psychometric function. Perception & Psychophysics, 61(1), 87–106.

Examples

data(HSP)
SHR2 <- subset(HSP, Obs == "SH" & Run == "R2")
SHR2 <- within(SHR2, {
	nyes <- N * p/100
	nno <- N - nyes
	})
SHR2.glm <- glm(cbind(nyes, nno) ~ log(Q), binomial, SHR2)
### For a real problem, set N to 10000 or so
SHR2.boot <- psyfun.boot(SHR2.glm, 10)

MPDiR documentation built on Aug. 19, 2023, 5:11 p.m.