MPSEM: Modeling Phylogenetic Signals using Eigenvector Maps

Computational tools to represent phylogenetic signals using adapted eigenvector maps.

AuthorGuillaume Guenard, with contribution from Pierre Legendre
Date of publication2015-12-17 16:22:15
MaintainerGuillaume Guenard <guillaume.guenard@gmail.com>
LicenseGPL (>= 2)
Version0.3-1

View on CRAN

Functions

add.edge Man page
add.vertex Man page
as.data.frame.PEM Man page
collapse.vertex Man page
EvolveOptimMarkovTree Man page
getAncGraphLocations Man page
getGraphLocations Man page
graph-class Man page
graph-functions Man page
lmforwardsequentialAICc Man page
lmforwardsequentialsidak Man page
Locations2PEMscores Man page
MPSEM Man page
MPSEM-package Man page
OUvar Man page
PEM.build Man page
PEM-class Man page
PEM.fitSimple Man page
PEM.forcedSimple Man page
PEMInfluence Man page
PEM.updater Man page
PEMvar Man page
PEMweights Man page
Phylo2DirectedGraph Man page
pop.graph Man page
predict.PEM Man page
print.graph Man page
print.PEM Man page
rm.edge Man page
rm.vertex Man page
TraitOUsimTree Man page
trait-simulator Man page
TraitVarGraphSim Man page

Files

MPSEM
MPSEM/inst
MPSEM/inst/doc
MPSEM/inst/doc/MPSEM.R
MPSEM/inst/doc/MPSEM.pdf
MPSEM/inst/doc/MPSEM.Rnw
MPSEM/src
MPSEM/src/MPSEM.c
MPSEM/src/MPSEM.h
MPSEM/NAMESPACE
MPSEM/R
MPSEM/R/MPSEM.R MPSEM/R/OUSim.R MPSEM/R/GraphFunctions.R MPSEM/R/PEM.R MPSEM/R/lmutils.R
MPSEM/vignettes
MPSEM/vignettes/PEM_with_MPSEM.bib
MPSEM/vignettes/MPSEM.Rnw
MPSEM/MD5
MPSEM/build
MPSEM/build/vignette.rds
MPSEM/DESCRIPTION
MPSEM/man
MPSEM/man/OUSim.Rd MPSEM/man/graph-class.Rd MPSEM/man/lmutils.Rd MPSEM/man/MPSEM-package.Rd MPSEM/man/GraphFunctions.Rd MPSEM/man/PEM-class.Rd MPSEM/man/PEM.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.