MPSEM: Modeling Phylogenetic Signals using Eigenvector Maps

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Computational tools to represent phylogenetic signals using adapted eigenvector maps.

Author
Guillaume Guenard, with contribution from Pierre Legendre
Date of publication
2015-12-17 16:22:15
Maintainer
Guillaume Guenard <guillaume.guenard@gmail.com>
License
GPL (>= 2)
Version
0.3-1

View on CRAN

Man pages

graph-class
Graph class and methods
GraphFunctions
Graph creation and manipulation functions
lmutils
Linear modelling utility functions
MPSEM-package
Modeling Phylogenetic Signals using Eigenvector Maps
OUSim
Simulates the evolution of a quantitative trait.
PEM
Phylogenetic Eigenvector Map
PEM-class
Class and methods for Phylogenetic Eigenvector Maps (PEM)

Files in this package

MPSEM
MPSEM/inst
MPSEM/inst/doc
MPSEM/inst/doc/MPSEM.R
MPSEM/inst/doc/MPSEM.pdf
MPSEM/inst/doc/MPSEM.Rnw
MPSEM/src
MPSEM/src/MPSEM.c
MPSEM/src/MPSEM.h
MPSEM/NAMESPACE
MPSEM/R
MPSEM/R/MPSEM.R
MPSEM/R/OUSim.R
MPSEM/R/GraphFunctions.R
MPSEM/R/PEM.R
MPSEM/R/lmutils.R
MPSEM/vignettes
MPSEM/vignettes/PEM_with_MPSEM.bib
MPSEM/vignettes/MPSEM.Rnw
MPSEM/MD5
MPSEM/build
MPSEM/build/vignette.rds
MPSEM/DESCRIPTION
MPSEM/man
MPSEM/man/OUSim.Rd
MPSEM/man/graph-class.Rd
MPSEM/man/lmutils.Rd
MPSEM/man/MPSEM-package.Rd
MPSEM/man/GraphFunctions.Rd
MPSEM/man/PEM-class.Rd
MPSEM/man/PEM.Rd