method_nearest: Nearest Neighbor Matching

In MatchIt: Nonparametric Preprocessing for Parametric Causal Inference

Nearest Neighbor Matching

Description

In matchit(), setting method = "nearest" performs greedy nearest neighbor matching. A distance is computed between each treated unit and each control unit, and, one by one, each treated unit is assigned a control unit as a match. The matching is "greedy" in the sense that there is no action taken to optimize an overall criterion; each match is selected without considering the other matches that may occur subsequently.

This page details the allowable arguments with method = "nearest". See matchit() for an explanation of what each argument means in a general context and how it can be specified.

Below is how matchit() is used for nearest neighbor matching:

matchit(formula,
        data = NULL,
        method = "nearest",
        distance = "glm",
        link = "logit",
        distance.options = list(),
        estimand = "ATT",
        exact = NULL,
        mahvars = NULL,
        antiexact = NULL,
        discard = "none",
        reestimate = FALSE,
        s.weights = NULL,
        replace = TRUE,
        m.order = NULL,
        caliper = NULL,
        ratio = 1,
        min.controls = NULL,
        max.controls = NULL,
        verbose = FALSE,
        ...) 

Arguments

formula	a two-sided formula object containing the treatment and covariates to be used in creating the distance measure used in the matching.
data	a data frame containing the variables named in formula. If not found in data, the variables will be sought in the environment.
method	set here to "nearest".
distance	the distance measure to be used. See distance for allowable options. Can be supplied as a distance matrix.
link	when distance is specified as a method of estimating propensity scores, an additional argument controlling the link function used in estimating the distance measure. See distance for allowable options with each option.
distance.options	a named list containing additional arguments supplied to the function that estimates the distance measure as determined by the argument to distance.
estimand	a string containing the desired estimand. Allowable options include "ATT" and "ATC". See Details.
exact	for which variables exact matching should take place.
mahvars	for which variables Mahalanobis distance matching should take place when distance corresponds to a propensity score (e.g., for caliper matching or to discard units for common support). If specified, the distance measure will not be used in matching.
antiexact	for which variables ant-exact matching should take place.
discard	a string containing a method for discarding units outside a region of common support. Only allowed when distance corresponds to a propensity score.
reestimate	if discard is not "none", whether to re-estimate the propensity score in the remaining sample prior to matching.
s.weights	the variable containing sampling weights to be incorporated into propensity score models and balance statistics.
replace	whether matching should be done with replacement.
m.order	the order that the matching takes place. Allowable options include "largest", where matching takes place in descending order of distance measures; "smallest", where matching takes place in ascending order of distance measures; "closest", where matching takes place in order of the distance between units; "random", where matching takes place in a random order; and "data" where matching takes place based on the order of units in the data. When m.order = "random", results may differ across different runs of the same code unless a seed is set and specified with set.seed(). The default of NULL corresponds to "largest" when a propensity score is estimated or supplied as a vector and "data" otherwise.
caliper	the width(s) of the caliper(s) used for caliper matching. See Details and Examples.
std.caliper	logical; when calipers are specified, whether they are in standard deviation units (TRUE) or raw units (FALSE).
ratio	how many control units should be matched to each treated unit for k:1 matching. For variable ratio matching, see section "Variable Ratio Matching" in Details below.
min.controls, max.controls	for variable ratio matching, the minimum and maximum number of controls units to be matched to each treated unit. See section "Variable Ratio Matching" in Details below.
verbose	logical; whether information about the matching process should be printed to the console. When TRUE, a progress bar implemented using RcppProgress will be displayed.
...	additional arguments that control the matching specification: reuse.max numeric; the maximum number of times each control can be used as a match. Setting reuse.max = 1 corresponds to matching without replacement (i.e., replace = FALSE), and setting reuse.max = Inf corresponds to traditional matching with replacement (i.e., replace = TRUE) with no limit on the number of times each control unit can be matched. Other values restrict the number of times each control can be matched when matching with replacement. replace is ignored when reuse.max is specified. unit.id one or more variables containing a unit ID for each observation, i.e., in case multiple observations correspond to the same unit. Once a control observation has been matched, no other observation with the same unit ID can be used as matches. This ensures each control unit is used only once even if it has multiple observations associated with it. Omitting this argument is the same as giving each observation a unique ID. Ignored when replace = TRUE.

Details

Mahalanobis Distance Matching

Mahalanobis distance matching can be done one of two ways:

1. If no propensity score needs to be estimated, distance should be set to "mahalanobis", and Mahalanobis distance matching will occur using all the variables in formula. Arguments to discard and mahvars will be ignored, and a caliper can only be placed on named variables. For example, to perform simple Mahalanobis distance matching, the following could be run:

   matchit(treat ~ X1 + X2, method = "nearest",
           distance = "mahalanobis") 

   With this code, the Mahalanobis distance is computed using X1 and X2, and matching occurs on this distance. The distance component of the matchit() output will be empty.

2. If a propensity score needs to be estimated for any reason, e.g., for common support with discard or for creating a caliper, distance should be whatever method is used to estimate the propensity score or a vector of distance measures. Use mahvars to specify the variables used to create the Mahalanobis distance. For example, to perform Mahalanobis within a propensity score caliper, the following could be run:

   matchit(treat ~ X1 + X2 + X3, method = "nearest",
           distance = "glm", caliper = .25,
           mahvars = ~ X1 + X2) 

   With this code, X1, X2, and X3 are used to estimate the propensity score (using the "glm" method, which by default is logistic regression), which is used to create a matching caliper. The actual matching occurs on the Mahalanobis distance computed only using X1 and X2, which are supplied to mahvars. Units whose propensity score difference is larger than the caliper will not be paired, and some treated units may therefore not receive a match. The estimated propensity scores will be included in the distance component of the matchit() output. See Examples.

Estimand

The estimand argument controls whether control units are selected to be matched with treated units (estimand = "ATT") or treated units are selected to be matched with control units (estimand = "ATC"). The "focal" group (e.g., the treated units for the ATT) is typically made to be the smaller treatment group, and a warning will be thrown if it is not set that way unless replace = TRUE. Setting estimand = "ATC" is equivalent to swapping all treated and control labels for the treatment variable. When estimand = "ATC", the default m.order is "smallest", and the match.matrix component of the output will have the names of the control units as the rownames and be filled with the names of the matched treated units (opposite to when estimand = "ATT"). Note that the argument supplied to estimand doesn't necessarily correspond to the estimand actually targeted; it is merely a switch to trigger which treatment group is considered "focal".

Variable Ratio Matching

matchit() can perform variable ratio "extremal" matching as described by Ming and Rosenbaum (2000). This method tends to result in better balance than fixed ratio matching at the expense of some precision. When ratio > 1, rather than requiring all treated units to receive ratio matches, each treated unit is assigned a value that corresponds to the number of control units they will be matched to. These values are controlled by the arguments min.controls and max.controls, which correspond to \alpha and \beta, respectively, in Ming and Rosenbaum (2000), and trigger variable ratio matching to occur. Some treated units will receive min.controls matches and others will receive max.controls matches (and one unit may have an intermediate number of matches); how many units are assigned each number of matches is determined by the algorithm described in Ming and Rosenbaum (2000, p119). ratio controls how many total control units will be matched: n1 * ratio control units will be matched, where n1 is the number of treated units, yielding the same total number of matched controls as fixed ratio matching does.

Variable ratio matching cannot be used with Mahalanobis distance matching or when distance is supplied as a matrix. The calculations of the numbers of control units each treated unit will be matched to occurs without consideration of caliper or discard. ratio does not have to be an integer but must be greater than 1 and less than n0/n1, where n0 and n1 are the number of control and treated units, respectively. Setting ratio = n0/n1 performs a crude form of full matching where all control units are matched. If min.controls is not specified, it is set to 1 by default. min.controls must be less than ratio, and max.controls must be greater than ratio. See Examples below for an example of their use.

Using m.order = "closest"

As of version 4.6.0, m.order can be set to "closest", which works regardless of how the distance measure is specified. This matches in order of the distance between units. The closest pair of units across all potential pairs of units will be matched first; the second closest pair of all potential pairs will be matched second, etc. This ensures that the best possible matches are given priority, and in that sense performs similarly to m.order = "smallest".

Outputs

All outputs described in matchit() are returned with method = "nearest". When replace = TRUE, the subclass component is omitted. include.obj is ignored.

Note

Sometimes an error will be produced by Rcpp along the lines of "function 'Rcpp_precious_remove' not provided by package 'Rcpp'". It is not immediately clear why this happens, though this thread appears to provide some insight. In a fresh session, run ⁠remove.packages(c("MatchIt", "Rcpp")); install.packages("MatchIt")⁠. This should sync MatchIt and Rcpp and ensure they work correctly.

References

In a manuscript, you don't need to cite another package when using method = "nearest" because the matching is performed completely within MatchIt. For example, a sentence might read:

Nearest neighbor matching was performed using the MatchIt package (Ho, Imai, King, & Stuart, 2011) in R.

See Also

matchit() for a detailed explanation of the inputs and outputs of a call to matchit().

method_optimal() for optimal pair matching, which is similar to nearest neighbor matching except that an overall distance criterion is minimized.

Examples

data("lalonde")

# 1:1 greedy NN matching on the PS
m.out1 <- matchit(treat ~ age + educ + race + nodegree +
                    married + re74 + re75, data = lalonde,
                  method = "nearest")
m.out1
summary(m.out1)

# 3:1 NN Mahalanobis distance matching with
# replacement within a PS caliper
m.out2 <- matchit(treat ~ age + educ + race + nodegree +
                    married + re74 + re75, data = lalonde,
                  method = "nearest", replace = TRUE,
                  mahvars = ~ age + educ + re74 + re75,
                  ratio = 3, caliper = .02)
m.out2
summary(m.out2, un = FALSE)

# 1:1 NN Mahalanobis distance matching within calipers
# on re74 and re75 and exact matching on married and race
m.out3 <- matchit(treat ~ age + educ + re74 + re75, data = lalonde,
                  method = "nearest", distance = "mahalanobis",
                  exact = ~ married + race,
                  caliper = c(re74 = .2, re75 = .15))
m.out3
summary(m.out3, un = FALSE)

# 2:1 variable ratio NN matching on the PS
m.out4 <- matchit(treat ~ age + educ + race + nodegree +
                    married + re74 + re75, data = lalonde,
                  method = "nearest", ratio = 2,
                  min.controls = 1, max.controls = 12)
m.out4
summary(m.out4, un = FALSE)

# Some units received 1 match and some received 12
table(table(m.out4$subclass[m.out4$treat == 0]))

MatchIt documentation built on Oct. 13, 2023, 9:08 a.m.