exportConcValues: Export filtered raw data as csv

In MetAlyzer: Read and Analyze 'MetIDQ™' Software Output Files

Export filtered raw data as csv

Description

This function exports the filtered raw data in the CSV format.

Usage

exportConcValues(metalyzer_se, ..., file_path = "metabolomics_data.csv")

Arguments

metalyzer_se	SummarizedExperiment
...	Additional columns from meta_data
file_path	file path

Examples

metalyzer_se <- MetAlyzer_dataset(file_path = example_extraction_data())

output_file <- file.path(tempdir(), "metabolomics_data.csv")
exportConcValues(
  metalyzer_se,
  `Sample Description`,
  Tissue,
  file_path = output_file
)
unlink(output_file)

MetAlyzer documentation built on April 3, 2025, 6:32 p.m.