MetaComp: EDGE Taxonomy Assignments Visualization

Implements routines for metagenome sample taxonomy assignments collection, aggregation, and visualization. Accepts the EDGE-formatted output from GOTTCHA/GOTTCHA2, BWA, Kraken, MetaPhlAn, DIAMOND, and Pangia. Produces SVG and PDF heatmap-like plots comparing taxa abundances across projects.

Getting started

Package details

AuthorPavel Senin [aut, cre]
MaintainerPavel Senin <[email protected]>
Package repositoryView on CRAN
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MetaComp documentation built on June 19, 2018, 1:03 a.m.