MetaComp: EDGE Taxonomy Assignments Visualization

Implements routines for metagenome sample taxonomy assignments collection, aggregation, and visualization. Accepts the EDGE-formatted output from GOTTCHA/GOTTCHA2, BWA, Kraken, MetaPhlAn, DIAMOND, and Pangia. Produces SVG and PDF heatmap-like plots comparing taxa abundances across projects.

Getting started

Package details

AuthorPavel Senin [aut, cre]
MaintainerPavel Senin <>
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

Try the MetaComp package in your browser

Any scripts or data that you put into this service are public.

MetaComp documentation built on May 2, 2019, 9:25 a.m.