getPosEntropy: Calculates aminoacidic entropy resulting from SNVs present in...
In MetaEntropy: Functional Shannon Entropy for Virome Mutational Analysis
View source: R/getPosEntropy.R
getPosEntropy R Documentation
Calculates aminoacidic entropy resulting from SNVs present in a specific locus
Description
The function is used internally by getEntropySignature.
It calculates Shannon entropy from categories and frequencies passed to the
function.
Usage
getPosEntropy(variantPosition)
Arguments
variantPosition
A list, created and passed to the function by
fillPosition. It contains information on the
frequencies of each amino acid category observed in a
virome, as a result of mutations at a given genomic
position.
Value
A numeric value, corresponding to the entropy associated to
the SNVs present at a specific locus.
See Also
getEntropySignature.
MetaEntropy documentation built on March 3, 2026, 5:08 p.m.
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View source: R/getPosEntropy.R
| getPosEntropy | R Documentation |
Calculates aminoacidic entropy resulting from SNVs present in a specific locus
Description
The function is used internally by getEntropySignature.
It calculates Shannon entropy from categories and frequencies passed to the
function.
Usage
getPosEntropy(variantPosition)
Arguments
variantPosition |
A list, created and passed to the function by
|
Value
A numeric value, corresponding to the entropy associated to
the SNVs present at a specific locus.
See Also
getEntropySignature.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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