links_stat: Link summary of the network

In MetaNet: Network Analysis for Omics Data

Link summary of the network

Description

Link summary of the network

Usage

links_stat(
  go,
  group = "v_class",
  e_type = "all",
  topN = 10,
  colors = NULL,
  mode = 1,
  plot_param = list()
)

Arguments

go	igraph or metanet
group	summary which group of vertex attribution in names(vertex_attr(go))
e_type	"positive", "negative", "all"
topN	topN of group, default: 10
colors	colors
mode	1~2
plot_param	plot parameters

Value

plot

See Also

Other topological: extract_sample_net(), fit_power(), get_group_skeleton(), nc(), net_par(), rand_net(), rand_net_par(), smallworldness()

Examples

if (requireNamespace("circlize")) {
  links_stat(co_net, topN = 10)
  module_detect(co_net) -> co_net_modu
  links_stat(co_net_modu, group = "module")
}
if (requireNamespace("corrplot")) {
  links_stat(co_net, topN = 10, mode = 2)
}

MetaNet documentation built on June 26, 2025, 5:07 p.m.