module_detect: Detect the modules

In MetaNet: Network Analysis for Omics Data

Detect the modules

Description

Detect the modules

Usage

module_detect(
  go,
  method = "cluster_fast_greedy",
  n_node_in_module = 0,
  delete = FALSE
)

Arguments

go	an igraph object
method	cluster_method: "cluster_walktrap", "cluster_edge_betweenness", "cluster_fast_greedy", "cluster_spinglass"
n_node_in_module	transfer the modules less than n_node_in_module to "others"
delete	logical, delete others modules? default:FALSE, the others module will be "others".

Value

an igraph object

See Also

Other module: filter_n_module(), get_community(), get_module_eigen(), get_module(), module_eigen(), module_net(), summary_module(), to_module_net(), zp_analyse()

Examples

data("c_net")
module_detect(co_net) -> co_net_modu

MetaNet documentation built on May 29, 2024, 1:21 a.m.