Example: Example dataset

In MetaSKAT: Meta Analysis for SNP-Set (Sequence) Kernel Association Test

Example dataset

Description

Example dataset

Format

This example dataset has the following objects:

y.list

a list object of binary phenotypes. It has 3 elements for 3 study cohorts. Each element is a vector of binary phenotypes.

x.list

a list object of covariates. It has 3 elements for 3 study cohorts. Each element is a matrix of covariates. The first and last elements have two covariates (two columns), and the second element has one covariate (one column).

n.g

a numeric value of the number of cohorts (3).

Z.list

a list object of genotypes of all samples. It has 10 elements for 10 genes. Each element is an nxp matrix with n being the total sample size (3000) and p being the number of SNPs.

MetaSKAT documentation built on Oct. 8, 2024, 5:07 p.m.