Man pages for MetabolicSurv
A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature
| CVLasoelacox | Cross Validations for Lasso Elastic Net Survival predictive... |
| cvle | Constructor for the cvle class |
| cvle-class | The cvle Class. |
| CVMajorityvotes | Cross validation for majority votes |
| CVMetSpecificCoxPh | Cross validation for the Metabolite specific analysis |
| cvmm | Constructor for the cvmm class |
| cvmm-class | The cvmm Class. |
| cvmv | Constructor for the cvmv class |
| cvmv-class | The cvmv Class. |
| CVPcaPls | Cross Validations for PCA and PLS based methods |
| cvpp | Constructor for the cvpp class |
| cvpp-class | The cvpp Class. |
| cvsim | Constructor for the cvsim class |
| cvsim-class | The cvsim Class. |
| CVSimet | Cross validation for sequentially increases metabolites |
| DataHR | Survival and Prognostic Data . |
| DistHR | Null Distribution of the Estimated HR |
| EstimateHR | Classification, Survival Estimation and Visualization |
| fcv | Constructor for the fcv class |
| fcv-class | The fcv Class. |
| Icvlasoel | Inner and Outer Cross Validations for Lasso Elastic Net... |
| Lasoelacox | Wapper function for glmnet |
| Majorityvotes | Classifiction for Majority Votes |
| MetabolicSurv | MetabolicSurv: A biomarker validation approach for predicting... |
| MetFreq | Frequency of Selected Metabolites from the LASSO, Elastic-net... |
| ms | The ms class |
| MSData | Generate Artificial Metabolic Survival Data |
| MSpecificCoxPh | Metabolite by metabolite Cox proportional analysis |
| perm | Constructor for the perm class |
| perm-class | The perm Class. |
| plot-cvle-missing-method | Plot method for cvle class |
| plot-cvmm-ANY-method | Plot method for cvmm class |
| plot-cvmv-ANY-method | Plot method for cvmv class |
| plot-cvpp-missing-method | Plot method for cvpp class |
| plot-cvsim-missing-method | Plot method for cvsim class |
| plot-fcv-missing-method | Plot method for fcv class |
| plot-ms-ANY-method | Plot method for ms class |
| plot-perm-ANY-method | Plot method for perm class |
| show-cvle-method | Show method for cvle class |
| show-cvmm-method | Show method for cvmm class |
| show-cvmv-method | Show method for cvmv class |
| show-cvpp-method | Show method for cvpp class |
| show-cvsim-method | Show method for cvsim class |
| show-fcv-method | Show method for fcv class |
| show-ms-method | Show method for ms class |
| show-perm-method | Show method for perm class |
| SIMet | Sequential Increase in Metabolites for the PCA or PLS... |
| summary-cvle-method | Summary method for cvle class |
| summary-cvmm-method | Summary method for cvmm class |
| summary-cvmv-method | Summary method for cvmv class |
| summary-cvpp-method | Summary method for cvpp class |
| summary-cvsim-method | Summary method for cvsim class |
| summary-fcv-method | Summary method for fcv class |
| summary-ms-method | Summary method for ms class |
| summary-perm-method | Summary method for perm class |
| SurvPcaClass | Survival PCA and Classification for metabolic data |
| SurvPlsClass | Survival PLS and Classification for metabolic data |
