fcv: Constructor for the fcv class

In MetabolicSurv: A Biomarker Validation Approach for Classification and Predicting Survival Using Metabolomics Signature

Description

Constructor for the fcv class

Usage

fcv(Runtime, Fold, Ncv, Nicv, TopK, HRInner, HRTest, Weight)

Arguments

Runtime	A vector of runtime for each iteration measured in seconds.
Fold	Number of folds used.
Ncv	Number of outer cross validations used.
Nicv	Number of inner cross validations used.
TopK	The Top metabolites used
HRInner	A 3-way array in which first, second, and third dimensions correspond to Nicv, 1, and Ncv respectively. This contains estimated HR for low risk group on the out of bag data.
HRTest	A matrix of survival information for the test dataset based on the out of bag data. It has three columns representing the estimated HR, the 95% lower confidence interval and the 95% upper confidence interval.
Weight	A matrix with columns equals number of TopK metabolites and rows Ncv. Note that Weights are estimated as colMeans of coefficients matrix return from the inner cross validations.

Value

object of class fcv

MetabolicSurv documentation built on June 11, 2021, 9:06 a.m.