Description Usage Format Examples

A numerical data example for MiST

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MiST.data contains the following objects:

G: a numeric genotype matrix of 3400 individuals and 93 SNPs. Each row represents a individual, and each column represents a SNP marker.

X: a numeric matrix of covariates with the first column represents intercept, the second column represents a continuous covariate, and the third column represents a binary covariate.

Z: a numeric vector of 1s for the second level covariate.

Z.func: a numeric matrix for the second level covariate. The first column contains all 1s, representing the intercept, and the second column is 0 or 1, representing whether a SNP marker is functional or non-functional.

maf: a numeric vector for the Minor Allele Frequecy of 93 SNPs.

y.con: a numeric vector of continuous outcomes.

y.bin: a numeric vector of binary outcomes.

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MiST documentation built on May 29, 2017, 11:34 a.m.

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