MixAll: Clustering using Mixture Models

Algorithms and methods for estimating parametric mixture models for mixed data and with missing data.

AuthorSerge Iovleff [aut, cre]
Date of publication2016-08-03 01:53:06
MaintainerSerge Iovleff <Serge.Iovleff@stkpp.org>
LicenseGPL (>= 2)
Version1.2.0

View on CRAN

Man pages

birds: Qualitative data : morphological description of birds

bullsEye: Quantitative Data: bullsEye

car: Qualitative data : Car Evaluation

clusterAlgo: Create an instance of the ['ClusterAlgo'] class

ClusterAlgo-class: ['ClusterAlgo'] class for Cluster algorithms.

clusterCategorical: Create an instance of the ['ClusterCategorical'] class

ClusterCategorical-class: Definition of the ['ClusterCategorical'] class

ClusterCategoricalComponent-class: Definition of the ['ClusterCategoricalComponent'] class

clusterCategoricalNames: Create a vector of Categorical mixture model names.

clusterDiagGaussian: Create an instance of the ['ClusterDiagGaussian'] class

ClusterDiagGaussian-class: Definition of the ['ClusterDiagGaussian'] class

ClusterDiagGaussianComponent-class: Definition of the ['ClusterDiagGaussianComponent'] class

clusterDiagGaussianNames: Create a vector of diagonal Gaussian mixture model names.

clusterGamma: Create an instance of the ['ClusterGamma'] class

ClusterGamma-class: Definition of the ['ClusterGamma'] class

ClusterGammaComponent-class: Definition of the ['ClusterGammaComponent'] class

clusterGammaNames: Create a vector of gamma mixture model names.

clusterInit: Create an instance of ['ClusterInit'] class

ClusterInit-class: Constructor of the ['ClusterInit'] class

clusterKernel: Create an instance of the ['ClusterKernel'] class

ClusterKernel-class: Definition of the ['ClusterKernel'] class

ClusterKernelComponent-class: Definition of the ['ClusterKernelComponent'] class

clusterKernelNames: Create a vector of Kernel mixture model names.

clusterMixedData: Create an instance of the ['ClusterMixedData'] class

ClusterMixedData-class: Definition of the ['ClusterMixedData'] class

ClusterModels-class: Interface base Class ['IClusterModel'] for Cluster models.

clusterPoisson: Create an instance of the ['ClusterPoisson'] class

ClusterPoisson-class: Definition of the ['ClusterPoisson'] class

clusterPoissonNames: Create a vector of Poisson mixture model names.

clusterStrategy: Create an instance of ['ClusterStrategy'] class

ClusterStrategy-class: Constructor of ['ClusterStrategy'] class

DebTrivedi: Counting Data: DebTrivedi

extract-methods: Extract parts of a MixAll S4 class

geyser: Quantitative data: Old Faithful Geyser

HeartDisease: Mixed data : Cleveland Heart Disease Data

IClusterComponent-class: Definition of the ['IClusterComponent'] class

initialize-methods: Initialize an instance of a MixAll S4 class.

learnAlgo: Create an instance of the ['LearnAlgo'] class

LearnAlgo-class: ['LearnAlgo'] class for Cluster algorithms.

learners: Create an instance of a learn mixture model

learnMixedData: This function learn the optimal mixture model when the class...

missingValues-methods: Return the missing values of a component or a cluster class.

MixAll-package: MixAll allows to estimate parametric mixture models with...

plot-ClusterCategorical-method: Plotting of a class ['ClusterCategorical']

plot-ClusterDiagGaussian-method: Plotting of a class ['ClusterDiagGaussian']

plot-ClusterGamma-method: Plotting of a class ['ClusterGamma']

plot-ClusterKernel-method: Plotting of a class ['ClusterKernel']

plot-ClusterMixedData-method: Plotting of a class ['ClusterMixedData']

plot-ClusterPoisson-method: Plotting of a class ['ClusterPoisson']

print-methods: Print a MixAll S4 class to standard output.

show-methods: Show description of a MixAll S4 class to standard output.

summary-methods: Produce summary of a MixAll S4 class.

titanic: Qualitative data: Survival of passengers on the Titanic

Files in this package

MixAll
MixAll/inst
MixAll/inst/projects
MixAll/inst/projects/Clustering
MixAll/inst/projects/Clustering/src
MixAll/inst/projects/Clustering/src/STK_MixtureFacade.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureInit.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureStrategy.cpp
MixAll/inst/projects/Clustering/src/STK_Clust_Util.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureSemiLearner.cpp
MixAll/inst/projects/Clustering/src/makefile
MixAll/inst/projects/Clustering/src/STK_IMixtureStatModel.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureCriterion.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureAlgo.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureComposer.cpp
MixAll/inst/projects/Clustering/src/makevars.local
MixAll/inst/projects/Clustering/src/STK_IMixtureLearner.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureLearner.cpp
MixAll/inst/projects/Clustering/src/STK_IMixture.cpp
MixAll/inst/projects/Clustering/src/STK_IMixtureModelBase.cpp
MixAll/inst/projects/Clustering/src/STK_IMixtureComposer.cpp
MixAll/inst/projects/Clustering/CMakeLists.txt
MixAll/inst/projects/Clustering/include
MixAll/inst/projects/Clustering/include/STK_MixtureCriterion.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategoricalBase.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategorical_pjk.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalMixtureManager.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalBridge.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategorical_pk.h
MixAll/inst/projects/Clustering/include/STK_IMixture.h
MixAll/inst/projects/Clustering/include/STK_IMixtureStatModel.h
MixAll/inst/projects/Clustering/include/STK_MixtureParameters.h
MixAll/inst/projects/Clustering/include/STK_IMixtureBridge.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_MixtureKernelGaussian.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelMixtureManager.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelGaussianBridge.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelGaussian.h
MixAll/inst/projects/Clustering/include/STK_MixtureAlgo.h
MixAll/inst/projects/Clustering/include/STK_MixtureStrategy.h
MixAll/inst/projects/Clustering/include/STK_IMixtureDensity.h
MixAll/inst/projects/Clustering/include/STK_IMixtureModel.h
MixAll/inst/projects/Clustering/include/STK_MixtureSemiLearner.h
MixAll/inst/projects/Clustering/include/STK_MixtureComposer.h
MixAll/inst/projects/Clustering/include/STK_IMixturePredictor.h
MixAll/inst/projects/Clustering/include/STK_IMixtureManager.h
MixAll/inst/projects/Clustering/include/STK_MixtureManager.h
MixAll/inst/projects/Clustering/include/STK_Clust_Util.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_b.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaMixtureManager.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaBridge.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_a_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_aj_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bj.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_b.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_aj_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGammaBase.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_a_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bj.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_DiagGaussianMixtureManager.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureDiagGaussianBase.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sk.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_DiagGaussianBridge.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sj.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sjk.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_s.h
MixAll/inst/projects/Clustering/include/STK_IMixtureLearner.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_ljlk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_PoissonBridge.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_PoissonMixtureManager.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_ljk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_lk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoissonBase.h
MixAll/inst/projects/Clustering/include/STK_MixtureInit.h
MixAll/inst/projects/Clustering/include/STK_MixtureFacade.h
MixAll/inst/projects/Clustering/include/STK_IMixtureComposer.h
MixAll/inst/projects/Clustering/include/STK_IMixtureModelBase.h
MixAll/inst/projects/Clustering/include/STK_MixtureLearner.h
MixAll/inst/projects/MixAll
MixAll/inst/projects/MixAll/ILauncher.h
MixAll/inst/projects/MixAll/RDataHandler.h
MixAll/inst/projects/MixAll/LearnLauncher.h
MixAll/inst/projects/MixAll/ClusterLauncher.h
MixAll/inst/projects/MixAll/ClusterFacade.h
MixAll/inst/NEWS.Rd
MixAll/inst/lib
MixAll/inst/lib/empty
MixAll/inst/makefile
MixAll/inst/makevars
MixAll/inst/bin
MixAll/inst/bin/empty
MixAll/inst/doc
MixAll/inst/doc/Learning-Mixtures.pdf
MixAll/inst/doc/Learning-Mixtures.R
MixAll/inst/doc/Learning-Mixtures.Rnw
MixAll/inst/doc/Introduction-Mixtures.pdf
MixAll/inst/doc/Introduction-Mixtures.Rnw
MixAll/inst/doc/Introduction-Mixtures.R
MixAll/inst/include
MixAll/inst/include/Clustering.h
MixAll/tests
MixAll/tests/clusterGammaLikelihood.R
MixAll/tests/ClusterSimul.R
MixAll/tests/clusterDiagGaussianLikelihood.R
MixAll/tests/simulNonLinear.R
MixAll/tests/testAllLearners.R
MixAll/tests/testPoissonExample.R
MixAll/tests/simulHeterogeneous.R
MixAll/src
MixAll/src/Makevars
MixAll/src/LearnLauncher.cpp
MixAll/src/ClusterLauncher.cpp
MixAll/src/RDataHandler.cpp
MixAll/src/ClusterFacade.cpp
MixAll/src/clusterMixAll.cpp
MixAll/src/learnMixAll.cpp
MixAll/src/ILauncher.cpp
MixAll/src/clusterMixAll.h
MixAll/src/learnMixAll.h
MixAll/NAMESPACE
MixAll/data
MixAll/data/bullsEye.rda
MixAll/data/HeartDisease.cat.rda
MixAll/data/DebTrivedi.rda
MixAll/data/geyser.rda
MixAll/data/birds.rda
MixAll/data/titanic.rda
MixAll/data/car.rda
MixAll/data/HeartDisease.cont.rda
MixAll/data/HeartDisease.target.rda
MixAll/R
MixAll/R/missingValues.R MixAll/R/ClusterPoisson.R MixAll/R/MixAll.R MixAll/R/ClusterStrategy.R MixAll/R/ClusterInit.R MixAll/R/IClusterModel.R MixAll/R/ClusterDiagGaussian.R MixAll/R/ClusterMixedData.R MixAll/R/LearnAlgo.R MixAll/R/ClusterModelNames.R MixAll/R/ClusterCategorical.R MixAll/R/Learners.R MixAll/R/ClusterAlgo.R MixAll/R/ClusterPlot.R MixAll/R/ClusterKernel.R MixAll/R/global.R MixAll/R/ClusterGamma.R
MixAll/vignettes
MixAll/vignettes/Learning-Mixtures.Rnw
MixAll/vignettes/MixAll.bib
MixAll/vignettes/Introduction-Mixtures.Rnw
MixAll/MD5
MixAll/build
MixAll/build/vignette.rds
MixAll/DESCRIPTION
MixAll/man
MixAll/man/summary-methods.Rd MixAll/man/clusterPoissonNames.Rd MixAll/man/missingValues-methods.Rd MixAll/man/clusterCategorical.Rd MixAll/man/ClusterAlgo-class.Rd MixAll/man/clusterDiagGaussian.Rd MixAll/man/clusterStrategy.Rd MixAll/man/ClusterStrategy-class.Rd MixAll/man/clusterCategoricalNames.Rd MixAll/man/clusterKernel.Rd MixAll/man/ClusterGammaComponent-class.Rd MixAll/man/clusterMixedData.Rd MixAll/man/clusterDiagGaussianNames.Rd MixAll/man/HeartDisease.Rd MixAll/man/ClusterKernelComponent-class.Rd MixAll/man/initialize-methods.Rd MixAll/man/ClusterPoisson-class.Rd MixAll/man/MixAll-package.Rd MixAll/man/extract-methods.Rd MixAll/man/learners.Rd MixAll/man/ClusterGamma-class.Rd MixAll/man/IClusterComponent-class.Rd MixAll/man/birds.Rd MixAll/man/LearnAlgo-class.Rd MixAll/man/ClusterInit-class.Rd MixAll/man/clusterInit.Rd MixAll/man/clusterGammaNames.Rd MixAll/man/print-methods.Rd MixAll/man/ClusterModels-class.Rd MixAll/man/ClusterCategoricalComponent-class.Rd MixAll/man/learnAlgo.Rd MixAll/man/plot-ClusterDiagGaussian-method.Rd MixAll/man/geyser.Rd MixAll/man/car.Rd MixAll/man/clusterKernelNames.Rd MixAll/man/bullsEye.Rd MixAll/man/plot-ClusterMixedData-method.Rd MixAll/man/plot-ClusterPoisson-method.Rd MixAll/man/ClusterCategorical-class.Rd MixAll/man/plot-ClusterKernel-method.Rd MixAll/man/DebTrivedi.Rd MixAll/man/ClusterKernel-class.Rd MixAll/man/plot-ClusterCategorical-method.Rd MixAll/man/plot-ClusterGamma-method.Rd MixAll/man/ClusterDiagGaussian-class.Rd MixAll/man/ClusterMixedData-class.Rd MixAll/man/clusterGamma.Rd MixAll/man/clusterPoisson.Rd MixAll/man/clusterAlgo.Rd MixAll/man/learnMixedData.Rd MixAll/man/titanic.Rd MixAll/man/show-methods.Rd MixAll/man/ClusterDiagGaussianComponent-class.Rd
MixAll/cleanup
MixAll/.Rinstignore

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