MixAll: Clustering using Mixture Models

Share:

Algorithms and methods for estimating parametric mixture models for mixed data and with missing data.

Author
Serge Iovleff [aut, cre]
Date of publication
2016-08-03 01:53:06
Maintainer
Serge Iovleff <Serge.Iovleff@stkpp.org>
License
GPL (>= 2)
Version
1.2.0

View on CRAN

Man pages

birds
Qualitative data : morphological description of birds
bullsEye
Quantitative Data: bullsEye
car
Qualitative data : Car Evaluation
clusterAlgo
Create an instance of the ['ClusterAlgo'] class
ClusterAlgo-class
['ClusterAlgo'] class for Cluster algorithms.
clusterCategorical
Create an instance of the ['ClusterCategorical'] class
ClusterCategorical-class
Definition of the ['ClusterCategorical'] class
ClusterCategoricalComponent-class
Definition of the ['ClusterCategoricalComponent'] class
clusterCategoricalNames
Create a vector of Categorical mixture model names.
clusterDiagGaussian
Create an instance of the ['ClusterDiagGaussian'] class
ClusterDiagGaussian-class
Definition of the ['ClusterDiagGaussian'] class
ClusterDiagGaussianComponent-class
Definition of the ['ClusterDiagGaussianComponent'] class
clusterDiagGaussianNames
Create a vector of diagonal Gaussian mixture model names.
clusterGamma
Create an instance of the ['ClusterGamma'] class
ClusterGamma-class
Definition of the ['ClusterGamma'] class
ClusterGammaComponent-class
Definition of the ['ClusterGammaComponent'] class
clusterGammaNames
Create a vector of gamma mixture model names.
clusterInit
Create an instance of ['ClusterInit'] class
ClusterInit-class
Constructor of the ['ClusterInit'] class
clusterKernel
Create an instance of the ['ClusterKernel'] class
ClusterKernel-class
Definition of the ['ClusterKernel'] class
ClusterKernelComponent-class
Definition of the ['ClusterKernelComponent'] class
clusterKernelNames
Create a vector of Kernel mixture model names.
clusterMixedData
Create an instance of the ['ClusterMixedData'] class
ClusterMixedData-class
Definition of the ['ClusterMixedData'] class
ClusterModels-class
Interface base Class ['IClusterModel'] for Cluster models.
clusterPoisson
Create an instance of the ['ClusterPoisson'] class
ClusterPoisson-class
Definition of the ['ClusterPoisson'] class
clusterPoissonNames
Create a vector of Poisson mixture model names.
clusterStrategy
Create an instance of ['ClusterStrategy'] class
ClusterStrategy-class
Constructor of ['ClusterStrategy'] class
DebTrivedi
Counting Data: DebTrivedi
extract-methods
Extract parts of a MixAll S4 class
geyser
Quantitative data: Old Faithful Geyser
HeartDisease
Mixed data : Cleveland Heart Disease Data
IClusterComponent-class
Definition of the ['IClusterComponent'] class
initialize-methods
Initialize an instance of a MixAll S4 class.
learnAlgo
Create an instance of the ['LearnAlgo'] class
LearnAlgo-class
['LearnAlgo'] class for Cluster algorithms.
learners
Create an instance of a learn mixture model
learnMixedData
This function learn the optimal mixture model when the class...
missingValues-methods
Return the missing values of a component or a cluster class.
MixAll-package
MixAll allows to estimate parametric mixture models with...
plot-ClusterCategorical-method
Plotting of a class ['ClusterCategorical']
plot-ClusterDiagGaussian-method
Plotting of a class ['ClusterDiagGaussian']
plot-ClusterGamma-method
Plotting of a class ['ClusterGamma']
plot-ClusterKernel-method
Plotting of a class ['ClusterKernel']
plot-ClusterMixedData-method
Plotting of a class ['ClusterMixedData']
plot-ClusterPoisson-method
Plotting of a class ['ClusterPoisson']
print-methods
Print a MixAll S4 class to standard output.
show-methods
Show description of a MixAll S4 class to standard output.
summary-methods
Produce summary of a MixAll S4 class.
titanic
Qualitative data: Survival of passengers on the Titanic

Files in this package

MixAll
MixAll/inst
MixAll/inst/projects
MixAll/inst/projects/Clustering
MixAll/inst/projects/Clustering/src
MixAll/inst/projects/Clustering/src/STK_MixtureFacade.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureInit.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureStrategy.cpp
MixAll/inst/projects/Clustering/src/STK_Clust_Util.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureSemiLearner.cpp
MixAll/inst/projects/Clustering/src/makefile
MixAll/inst/projects/Clustering/src/STK_IMixtureStatModel.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureCriterion.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureAlgo.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureComposer.cpp
MixAll/inst/projects/Clustering/src/makevars.local
MixAll/inst/projects/Clustering/src/STK_IMixtureLearner.cpp
MixAll/inst/projects/Clustering/src/STK_MixtureLearner.cpp
MixAll/inst/projects/Clustering/src/STK_IMixture.cpp
MixAll/inst/projects/Clustering/src/STK_IMixtureModelBase.cpp
MixAll/inst/projects/Clustering/src/STK_IMixtureComposer.cpp
MixAll/inst/projects/Clustering/CMakeLists.txt
MixAll/inst/projects/Clustering/include
MixAll/inst/projects/Clustering/include/STK_MixtureCriterion.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategoricalBase.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategorical_pjk.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalMixtureManager.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_CategoricalBridge.h
MixAll/inst/projects/Clustering/include/CategoricalMixtureModels/STK_MixtureCategorical_pk.h
MixAll/inst/projects/Clustering/include/STK_IMixture.h
MixAll/inst/projects/Clustering/include/STK_IMixtureStatModel.h
MixAll/inst/projects/Clustering/include/STK_MixtureParameters.h
MixAll/inst/projects/Clustering/include/STK_IMixtureBridge.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_MixtureKernelGaussian.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelMixtureManager.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelGaussianBridge.h
MixAll/inst/projects/Clustering/include/KernelMixtureModels/STK_KernelGaussian.h
MixAll/inst/projects/Clustering/include/STK_MixtureAlgo.h
MixAll/inst/projects/Clustering/include/STK_MixtureStrategy.h
MixAll/inst/projects/Clustering/include/STK_IMixtureDensity.h
MixAll/inst/projects/Clustering/include/STK_IMixtureModel.h
MixAll/inst/projects/Clustering/include/STK_MixtureSemiLearner.h
MixAll/inst/projects/Clustering/include/STK_MixtureComposer.h
MixAll/inst/projects/Clustering/include/STK_IMixturePredictor.h
MixAll/inst/projects/Clustering/include/STK_IMixtureManager.h
MixAll/inst/projects/Clustering/include/STK_MixtureManager.h
MixAll/inst/projects/Clustering/include/STK_Clust_Util.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_b.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaMixtureManager.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_GammaBridge.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_a_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_aj_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ak_bj.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_b.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_aj_bk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGammaBase.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_a_bjk.h
MixAll/inst/projects/Clustering/include/GammaMixtureModels/STK_MixtureGamma_ajk_bj.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_DiagGaussianMixtureManager.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureDiagGaussianBase.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sk.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_DiagGaussianBridge.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sj.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_sjk.h
MixAll/inst/projects/Clustering/include/DiagGaussianMixtureModels/STK_MixtureGaussian_s.h
MixAll/inst/projects/Clustering/include/STK_IMixtureLearner.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_ljlk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_PoissonBridge.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_PoissonMixtureManager.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_ljk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoisson_lk.h
MixAll/inst/projects/Clustering/include/PoissonMixtureModels/STK_MixturePoissonBase.h
MixAll/inst/projects/Clustering/include/STK_MixtureInit.h
MixAll/inst/projects/Clustering/include/STK_MixtureFacade.h
MixAll/inst/projects/Clustering/include/STK_IMixtureComposer.h
MixAll/inst/projects/Clustering/include/STK_IMixtureModelBase.h
MixAll/inst/projects/Clustering/include/STK_MixtureLearner.h
MixAll/inst/projects/MixAll
MixAll/inst/projects/MixAll/ILauncher.h
MixAll/inst/projects/MixAll/RDataHandler.h
MixAll/inst/projects/MixAll/LearnLauncher.h
MixAll/inst/projects/MixAll/ClusterLauncher.h
MixAll/inst/projects/MixAll/ClusterFacade.h
MixAll/inst/NEWS.Rd
MixAll/inst/lib
MixAll/inst/lib/empty
MixAll/inst/makefile
MixAll/inst/makevars
MixAll/inst/bin
MixAll/inst/bin/empty
MixAll/inst/doc
MixAll/inst/doc/Learning-Mixtures.pdf
MixAll/inst/doc/Learning-Mixtures.R
MixAll/inst/doc/Learning-Mixtures.Rnw
MixAll/inst/doc/Introduction-Mixtures.pdf
MixAll/inst/doc/Introduction-Mixtures.Rnw
MixAll/inst/doc/Introduction-Mixtures.R
MixAll/inst/include
MixAll/inst/include/Clustering.h
MixAll/tests
MixAll/tests/clusterGammaLikelihood.R
MixAll/tests/ClusterSimul.R
MixAll/tests/clusterDiagGaussianLikelihood.R
MixAll/tests/simulNonLinear.R
MixAll/tests/testAllLearners.R
MixAll/tests/testPoissonExample.R
MixAll/tests/simulHeterogeneous.R
MixAll/src
MixAll/src/Makevars
MixAll/src/LearnLauncher.cpp
MixAll/src/ClusterLauncher.cpp
MixAll/src/RDataHandler.cpp
MixAll/src/ClusterFacade.cpp
MixAll/src/clusterMixAll.cpp
MixAll/src/learnMixAll.cpp
MixAll/src/ILauncher.cpp
MixAll/src/clusterMixAll.h
MixAll/src/learnMixAll.h
MixAll/NAMESPACE
MixAll/data
MixAll/data/bullsEye.rda
MixAll/data/HeartDisease.cat.rda
MixAll/data/DebTrivedi.rda
MixAll/data/geyser.rda
MixAll/data/birds.rda
MixAll/data/titanic.rda
MixAll/data/car.rda
MixAll/data/HeartDisease.cont.rda
MixAll/data/HeartDisease.target.rda
MixAll/R
MixAll/R/missingValues.R
MixAll/R/ClusterPoisson.R
MixAll/R/MixAll.R
MixAll/R/ClusterStrategy.R
MixAll/R/ClusterInit.R
MixAll/R/IClusterModel.R
MixAll/R/ClusterDiagGaussian.R
MixAll/R/ClusterMixedData.R
MixAll/R/LearnAlgo.R
MixAll/R/ClusterModelNames.R
MixAll/R/ClusterCategorical.R
MixAll/R/Learners.R
MixAll/R/ClusterAlgo.R
MixAll/R/ClusterPlot.R
MixAll/R/ClusterKernel.R
MixAll/R/global.R
MixAll/R/ClusterGamma.R
MixAll/vignettes
MixAll/vignettes/Learning-Mixtures.Rnw
MixAll/vignettes/MixAll.bib
MixAll/vignettes/Introduction-Mixtures.Rnw
MixAll/MD5
MixAll/build
MixAll/build/vignette.rds
MixAll/DESCRIPTION
MixAll/man
MixAll/man/summary-methods.Rd
MixAll/man/clusterPoissonNames.Rd
MixAll/man/missingValues-methods.Rd
MixAll/man/clusterCategorical.Rd
MixAll/man/ClusterAlgo-class.Rd
MixAll/man/clusterDiagGaussian.Rd
MixAll/man/clusterStrategy.Rd
MixAll/man/ClusterStrategy-class.Rd
MixAll/man/clusterCategoricalNames.Rd
MixAll/man/clusterKernel.Rd
MixAll/man/ClusterGammaComponent-class.Rd
MixAll/man/clusterMixedData.Rd
MixAll/man/clusterDiagGaussianNames.Rd
MixAll/man/HeartDisease.Rd
MixAll/man/ClusterKernelComponent-class.Rd
MixAll/man/initialize-methods.Rd
MixAll/man/ClusterPoisson-class.Rd
MixAll/man/MixAll-package.Rd
MixAll/man/extract-methods.Rd
MixAll/man/learners.Rd
MixAll/man/ClusterGamma-class.Rd
MixAll/man/IClusterComponent-class.Rd
MixAll/man/birds.Rd
MixAll/man/LearnAlgo-class.Rd
MixAll/man/ClusterInit-class.Rd
MixAll/man/clusterInit.Rd
MixAll/man/clusterGammaNames.Rd
MixAll/man/print-methods.Rd
MixAll/man/ClusterModels-class.Rd
MixAll/man/ClusterCategoricalComponent-class.Rd
MixAll/man/learnAlgo.Rd
MixAll/man/plot-ClusterDiagGaussian-method.Rd
MixAll/man/geyser.Rd
MixAll/man/car.Rd
MixAll/man/clusterKernelNames.Rd
MixAll/man/bullsEye.Rd
MixAll/man/plot-ClusterMixedData-method.Rd
MixAll/man/plot-ClusterPoisson-method.Rd
MixAll/man/ClusterCategorical-class.Rd
MixAll/man/plot-ClusterKernel-method.Rd
MixAll/man/DebTrivedi.Rd
MixAll/man/ClusterKernel-class.Rd
MixAll/man/plot-ClusterCategorical-method.Rd
MixAll/man/plot-ClusterGamma-method.Rd
MixAll/man/ClusterDiagGaussian-class.Rd
MixAll/man/ClusterMixedData-class.Rd
MixAll/man/clusterGamma.Rd
MixAll/man/clusterPoisson.Rd
MixAll/man/clusterAlgo.Rd
MixAll/man/learnMixedData.Rd
MixAll/man/titanic.Rd
MixAll/man/show-methods.Rd
MixAll/man/ClusterDiagGaussianComponent-class.Rd
MixAll/cleanup
MixAll/.Rinstignore