NEpiC: Network Assisted Algorithm for Epigenetic Studies Using Mean and Variance Combined Signals

Package for a Network assisted algorithm for Epigenetic studies using mean and variance Combined signals: NEpiC. NEpiC combines both signals in mean and variance differences in methylation level between case and control groups searching for differentially methylated sub-networks (modules) using the protein-protein interaction network.

AuthorPeifeng Ruan
Date of publication2016-03-26 15:13:10
MaintainerPeifeng Ruan <pruan12@fudan.edu.cn>
LicenseGPL-2
Version1.0.1

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Files

NEpiC
NEpiC/NAMESPACE
NEpiC/R
NEpiC/R/seedQueryJ.r
NEpiC/R/permutation.r
NEpiC/R/integGM.r
NEpiC/R/candidate_genes.r
NEpiC/R/node2treePath.r
NEpiC/R/c_score.r
NEpiC/R/globalQueryJ.r
NEpiC/R/c_dms.r
NEpiC/MD5
NEpiC/DESCRIPTION
NEpiC/man
NEpiC/man/candidate_genes.Rd NEpiC/man/c_score.Rd NEpiC/man/c_dms.Rd NEpiC/man/permutation.Rd

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