NMapplyFilters: Translate Nonmem filters to R code and apply to data

In NMdata: Preparation, Checking and Post-Processing Data for PK/PD Modeling

Translate Nonmem filters to R code and apply to data

Description

Translate Nonmem filters to R code and apply to data

Usage

NMapplyFilters(data, file, lines, filters, invert = FALSE, as.fun, quiet)

Arguments

data	An input data object. Could be read with NMreadCsv or NMscanInput.
file	Path to mod/lst file. Only one of file or lines to be given. See '?NMreadSection' for understanding when to use, file, or lines. Only used when 'filters' not provided.
lines	The mod/lst as character, line by line.
filters	A 'data.frame' with filters as returned by 'NMreadFilters()'. If not supplied, filters will be read from 'file'/'lines'.
invert	Invert the filters? This means read what Nonmem would disregard, and disregard what Nonmem would read.
as.fun	The default is to return data as a data.frame. Pass a function (say tibble::as_tibble) in as.fun to convert to something else. If data.tables are wanted, use as.fun="data.table". The default can be configured using NMdataConf.
quiet	Don't report information along the way if no warnings or errors. Default is FALSE.

Details

This is not bulletproof. Nested conditions are not supported altogether.

Value

data with filters applied

See Also

NMreadFilters

Other Nonmem: NMextractText(), NMgenText(), NMreadSection(), NMreplaceDataFile(), NMwriteSection()

NMdata documentation built on Nov. 5, 2025, 5:43 p.m.