plot.boot_glasso: Plot Method for boot_glasso

In Nestimate: Network Estimation, Bootstrap, and Higher-Order Analysis

Plot Method for boot_glasso

Description

Plots bootstrap results for GLASSO networks.

Usage

## S3 method for class 'boot_glasso'
plot(x, type = "edges", measure = NULL, ...)

Arguments

x	A boot_glasso object.
type	Character. Plot type: "edges" (default), "stability", "edge_diff", "centrality_diff", or "inclusion".
measure	Character. Centrality measure for type = "centrality_diff" (default: first available measure).
...	Additional arguments passed to plotting functions. For type = "edge_diff" and type = "centrality_diff", accepts order: "sample" (default, sorted by value) or "id" (alphabetical).

Value

A ggplot object, invisibly.

Examples

set.seed(1)
dat <- as.data.frame(matrix(rnorm(60), ncol = 3))
bg <- boot_glasso(dat, iter = 10, cs_iter = 5, centrality = "strength")
plot(bg, type = "edges")

set.seed(42)
mat <- matrix(rnorm(60), ncol = 4)
colnames(mat) <- LETTERS[1:4]
boot <- boot_glasso(as.data.frame(mat), iter = 20, cs_iter = 10,
  centrality = "strength", seed = 42)
plot(boot, type = "edges")

Nestimate documentation built on April 20, 2026, 5:06 p.m.