R/mpoxdat.R

In NobBS: Nowcasting by Bayesian Smoothing

#' mpoxdat: Mpox reporting data from the 2022 New York City Outbreak
#'
#' Surveillance line list data provided by the New York City (NYC) Health Department
#' at https://github.com/nychealth/mpox_nowcast_eval, to accompany a nowcasting performance evaluation (doi: 10.2196/56495).
#' Patients with a confirmed or probable mpox diagnosis or illness onset from July 8 through September 30, 2022 were included.
#' The dataset contains 3323 rows and 4 columns.
#' The first column, \code{dx_date}, is the specimen collection date of the first positive mpox laboratory result.
#' The second column, \code{dx_report_date}, is the date the report of first positive mpox laboratory result was received by the NYC Health Department.
#' The third column, \code{onset_date}, is the mpox symptom onset date.
#' The fourth column, \code{onset_report_date}, is the date symptom onset date was received by the NYC Health Department.
#'
#' @docType data
#'
#' @usage data(mpoxdat)
#'
#' @format A data frame.
#'
#' @keywords mpox
#'
#' @examples
#' data(mpoxdat)
#' nowcast <- NobBS(mpoxdat, as.Date("2022-08-31"),units="1 day",onset_date="dx_date",
#' report_date="dx_report_date",moving_window=14)
#' nowcast$estimates

"mpoxdat"