Man pages for Nonpareil
Metagenome Coverage Estimation and Projections for 'Nonpareil'
| cash-Nonpareil.Curve-method | Get attribute. |
| cash-Nonpareil.Set-method | Get attribute. |
| cash-set-Nonpareil.Curve-method | Set attribute. |
| cash-set-Nonpareil.Set-method | Set attribute. |
| Nonpareil | Nonpareil: Metagenome Coverage Estimation and Projections for... |
| Nonpareil.add.curve | Adds a 'Nonpareil.Curve' to a 'Nonpareil.Set'. |
| Nonpareil.antif | Complement function of 'Nonpareil.f'. |
| Nonpareil.col | Returns the color of the curve. |
| Nonpareil.coverage_factor | Factor to transform redundancy into coverage (internal... |
| Nonpareil.curve | Generates a Nonpareil curve from an .npo file |
| Nonpareil.curve.batch | Alias of 'Nonpareil.set'. |
| Nonpareil.Curve-class | A single Nonpareil curve. This object can be produced by... |
| Nonpareil.f | Function of the projected model. |
| Nonpareil.fit_model | Fit the sigmoidal model to the rarefied coverage. |
| Nonpareil.legend | Generates a legend for Nonpareil plots. |
| Nonpareil.read_data | Read the data tables and extract direct estimates. |
| Nonpareil.read_metadata | Read the metadata headers. |
| Nonpareil.set | Generates a collection of Nonpareil curves (a 'Nonpareil.Set'... |
| Nonpareil.Set-class | Collection of 'Nonpareil.Curve' objects. This object can be... |
| plot.Nonpareil.Curve | Plot a 'Nonpareil.Curve' object. |
| plot.Nonpareil.Set | Plot a 'Nonpareil.Set' object. |
| plus-Nonpareil.Set-ANY-method | Alias of 'Nonpareil.add.curve'. |
| predict.Nonpareil.Curve | Predict the coverage for a given sequencing effort. |
| print.Nonpareil.Curve | Prints and returns invisibly a summary of the... |
| print.Nonpareil.Set | Prints and returns invisibly a summary of the 'Nonpareil.Set'... |
| summary.Nonpareil.Curve | Returns a summary of the 'Nonpareil.Curve' results. |
| summary.Nonpareil.Set | Returns a summary of the 'Nonpareil.Set' results. |
