Nonpareil: Nonpareil: Metagenome Coverage Estimation and Projections for...
In Nonpareil: Metagenome Coverage Estimation and Projections for 'Nonpareil'
Description
Plot, process, and analyze NPO files produced by 'Nonpareil'
http://enve-omics.ce.gatech.edu/nonpareil/.
Citation
If you use Nonpareil, please cite:
Rodriguez-R et al. 2018. Nonpareil 3: Fast estimation of metagenomic coverage
and sequence diversity.
mSystems 3(3): e00039-18. DOI: 10.1128/mSystems.00039-18.
Rodriguez-R & Konstantinidis. 2014. Nonpareil: a redundancy-based approach to
assess the level of coverage in metagenomic datasets.
Bioinformatics 30 (5): 629-635. DOI: 10.1093/bioinformatics/btt584.
For an extended discussion on coverage in metagenomic data, see also:
Rodriguez-R & Konstantinidis. 2014. Estimating coverage in metagenomic data
sets and why it matters.
The ISME Journal 8: 2349–2351. DOI: 10.1038/ismej.2014.76.
Nonpareil documentation built on Jan. 29, 2022, 1:08 a.m.
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Description
Plot, process, and analyze NPO files produced by 'Nonpareil' http://enve-omics.ce.gatech.edu/nonpareil/.
Citation
If you use Nonpareil, please cite: Rodriguez-R et al. 2018. Nonpareil 3: Fast estimation of metagenomic coverage and sequence diversity. mSystems 3(3): e00039-18. DOI: 10.1128/mSystems.00039-18.
Rodriguez-R & Konstantinidis. 2014. Nonpareil: a redundancy-based approach to assess the level of coverage in metagenomic datasets. Bioinformatics 30 (5): 629-635. DOI: 10.1093/bioinformatics/btt584.
For an extended discussion on coverage in metagenomic data, see also:
Rodriguez-R & Konstantinidis. 2014. Estimating coverage in metagenomic data sets and why it matters. The ISME Journal 8: 2349–2351. DOI: 10.1038/ismej.2014.76.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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