ormdr: ORMDR : Odds ratio based multifactor-dimensioinality...
In ORMDR: ORMDR

Description Usage Arguments Value Examples

ORMDR usesthe odds ratio as a new quantitative measure of disease risk.

1	ormdr(dataset,bestcombi,cs,colresp,CI.Asy,CI.Boot,B)

`dataset`	SNP data set with class variable
`bestcombi`	best combination from mdr.c function
`cs`	how to code "case" class
`colresp`	location of class variable in dataset
`CI.Asy`	indicator whether asymptotic CI is calculated or not
`CI.Boot`	indicator whether bootstrap CI is calculated or not
`B`	number of bootstrap samples

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data(sample.dat)
z<-mdr.c(sample.dat, colresp=21, cs=1, combi=2, cv.fold = 10)
ormdr(sample.dat,bestcombi=as.numeric(z$best.combi),cs=1,colresp=21,CI.Asy=TRUE,CI.Boot=TRUE,B=1000)