Files in OUwie
Analysis of Evolutionary Rates in an OU Framework
MD5
README.md
NAMESPACE
DESCRIPTION
R/hOUwie.pruning.R
R/OUwie.boot.R
R/hOUwie.internal.R
R/check.identify.R
R/dentist.R
R/OUwie.dredge.R
R/OUwie.R
R/OUwie.sim.R
R/adjust_bounds.R
R/hOUwie.proposal.R
R/hOUwie.R
R/OUwie.format.R
R/varcov.ou.R
R/OUwie.contour.R
R/vcvbypass.functions.R
R/OUwie.fixed.R
R/hOUwie.bridge.R
R/fix.kappa.R
R/weight.mat.R
R/OUwie.anc.R
R/expect.trendy.R
inst/doc/hOUwieStarterGuide.pdf
inst/doc/calculationUpdate.pdf
inst/doc/hOUwiePerformance.pdf
inst/doc/hOUwieStarterGuide.Rmd
inst/doc/OUwie_2.1_adds.Rmd
inst/doc/calculationUpdate.R
inst/doc/calculationUpdate.Rmd
inst/doc/hOUwiePerformance.Rmd
inst/doc/hOUwieStarterGuide.R
inst/doc/OUwie_2.1_adds.R
inst/doc/hOUwiePerformance.R
inst/doc/OUwie_2.1_adds.pdf
build/vignette.rds
tests/testthat.R
tests/testthat/test-anc-state.R
tests/testthat/test-houwie.R
tests/testthat/test-houwie-tree-plan.R
tests/testthat/test-edge-order.R
tests/testthat/test-houwie-pruning.R
tests/testthat/test-likelihood.R
tests/testthat/test-houwie-sampling.R
tests/testthat/test-restart.R
tests/testthat/test-model-averaging.R
vignettes/hOUwieStarterGuide.Rmd
vignettes/OUwie_2.1_adds.Rmd
vignettes/surfaceDatRIndent1_2.Rsave
vignettes/calculationUpdate.Rmd
vignettes/simUnidentifiable.Rsave
vignettes/surfaceDatNRIndent1_3.Rsave
vignettes/ou.sim500.tre
vignettes/hOUwiePerformance.Rmd
vignettes/surfaceDatRIndentR_2.Rsave
vignettes/simIdentifiable.Rsave
vignettes/surfaceDatNRIndent1_2.Rsave
data/tworegime.rda
data/sim.ex.rda
man/OUwie.anc.Rd
man/Example.Rd
man/hOUwie.walk.Rd
man/getModelTable.Rd
man/getOUParamStructure.Rd
man/dent_propose.Rd
man/hOUwie.sim.Rd
man/summary.dentist.Rd
man/plot.dentist.Rd
man/OUwie.contour.Rd
man/hOUwie.Rd
man/print.dentist.Rd
man/OUwie.sim.Rd
man/dent_likelihood.Rd
man/plot.OUwie.contour.Rd
man/hOUwie.fixed.Rd
man/OUwie.dredge.Rd
man/hOUwie.recon.Rd
man/dent_walk.Rd
man/check.identify.Rd
man/hOUwie.thorough.Rd
man/fix.kappa.Rd
man/OUwie.fixed.Rd
man/OUwie.Rd
man/OUwie.boot.Rd
man/OUwie.format.Rd
man/getModelAvgParams.Rd
