problematic_chronograms: Problematic chronograms from Open Tree of Life.

In OpenTreeChronograms: Open Tree of Life Chronograms

Problematic chronograms from Open Tree of Life.

Description

Problematic chronograms from Open Tree of Life.

Usage

problematic_chronograms

Format

A list of trees with unmapped taxa

Details

Before we developed tools to clean and map tip labels for our cached trees we found some trees that were stored with unmapped tip labels we extracted them and saved them to be used for testing functions. Generated with problematic_chronograms <- opentree_chronograms$trees[sapply(sapply(opentree_chronograms$trees, "[", "tip.label"), function(x) any(grepl("not.mapped", x)))] usethis::use_data(problematic_chronograms) opentree_chronograms object from commit https://github.com/phylotastic/datelife/tree/be894448f6fc437241cd0916fab45e84ac3e09c6

[", "tip.label"), function(x) any(grepl("not.mapped", x)))]: R:%22,%20%22tip.label%22),%20function(x)%20any(grepl(%22not.mapped%22,%20x)))

Source

http://opentreeoflife.org

OpenTreeChronograms documentation built on June 22, 2022, 9:08 a.m.