Files in OutbreakTools
Basic Tools for the Analysis of Disease Outbreaks
DESCRIPTION
ChangeLog
NAMESPACE
MD5
data/FluH1N1pdm2009.RData
data/HorseFlu.RData
data/ToyOutbreakRaw.RData
data/HorseFluRaw.RData
data/ToyOutbreak.RData
vignettes/OutbreakTools.Rnw
R/obkData_Accessors.R
R/get.incidence.R
R/plotIndividualTimeline.R
R/dna2uniqSequences.R
R/annotatedTreeReader.R
R/auxClasses.R
R/OutbreakTools.R
R/importFromJSON.R
R/phylo2ggphy.R
R/obkSequences.R
R/make.attributes.R
R/generics.R
R/utils.R
R/obkContacts.R
R/obkData_basics.R
R/make.phylo.R
R/zzz.R
R/simuEpi.R
R/plotGeo.R
R/plotggMST.R
R/obkData.R
R/plotggphy.R
R/plot.R
R/uniqSequences.R
R/subset.R
inst/files/BEAST-expl.nex
inst/doc/OutbreakTools.R
inst/doc/OutbreakTools.pdf
inst/doc/OutbreakTools.Rnw
man/get.incidence.Rd
man/plotggMST.Rd
man/simuEpi.Rd
man/plotGeo.Rd
man/plotIndividualTimeline.Rd
man/make.attributes.Rd
man/importFromJSON.Rd
man/HorseFluRaw.Rd
man/OutbreakTools.package.Rd
man/annotatedTreeReader.Rd
man/phylo2ggphy.Rd
man/HorseFlu.Rd
man/uniqSequences.Rd
man/dna2uniqSequences.Rd
man/plotggphy.Rd
man/ToyOutbreakRaw.Rd
man/phylofromtranstree.Rd
man/plotEpi.Rd
man/ToyOutbreak.Rd
man/get.dates.Rd
man/obkSequences.Rd
man/obkContacts.Rd
man/auxClasses.Rd
man/subset.Rd
man/get.data.Rd
man/get.individuals.Rd
man/make.phylo.Rd
man/FluH1N1pdm2009.Rd
man/obkData.Rd
man/obkDataPlot.Rd
build/vignette.rds
