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PAFway: Pairwise Association of Functional Annotations
Finds pairs of functional annotations or gene ontology (GO) terms that are enriched within a directed network (such as a gene regulatory network). This works with or without edge weights and includes visualizations (both as a network where the functions are nodes and as a heatmap). PAFway is an acronym for Pairwise Associations of Functional annotations in biological networks and pathWAYs.
Getting started
Browse package contents
Package details |
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| Author | Daphne Ezer [aut, cre], Mahair Mahjoub [aut] |
| Maintainer | Daphne Ezer <daphne.ezer@york.ac.uk> |
| License | GPL (>= 2) |
| Version | 0.1.3 |
| Package repository | View on CRAN |
| Installation |
Install the latest version of this package by entering the following in R:
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