API for PAGI
The package can identify the dysregulated KEGG pathways based on global influence from the internal effect of pathways and crosstalk between pathways.

Global functions
CalGIF Man page Source code
CalGIF2 Man page Source code
ExampleData Man page
PAGI.EnrichmentScore Man page Source code
PAGI.EnrichmentScore2 Man page Source code
PAGI.Main Man page Source code
PAGIData Man page
RandomWalk2igraph Man page Source code
calTest Man page Source code
class.labels Man page
dataset Man page
getclass.labels Man page Source code
getdataset Man page Source code
initializePAGI Man page Source code
initializePAGIExample Man page Source code
netWorkdata Man page
pathway.db Man page
rw Man page Source code
PAGI documentation built on May 1, 2019, 7:48 p.m.