build_injec_seq: Create Injection Sequence
In PKbioanalysis: Pharmacokinetic Bioanalysis Experiments Design and Exploration

build_injec_seq

R Documentation

Create Injection Sequence

Description

Create Injection Sequence

Create Injection Sequence from PlateObj (Single Plate)

Create Injection Sequence from MultiPlate (Multiple Plates)

Usage

build_injec_seq(
  plate,
  method,
  rep_DB = 2,
  rep_ISblank = 1,
  rep_suitability = 1,
  rep_blank = 2,
  repeat_std = 1,
  repeat_qc = 1,
  repeat_analyte = 1,
  repeat_dqc = 1,
  n_explore = 0,
  blank_after_top_conc = TRUE,
  blank_at_end = TRUE,
  blank_every_n = NULL,
  injec_vol,
  descr = "",
  prefix = Sys.Date(),
  suffix = "1",
  tray = 1,
  conc_df = NULL,
  grouped = TRUE
)

## S4 method for signature 'PlateObj'
build_injec_seq(
  plate,
  method,
  rep_DB = 2,
  rep_ISblank = 1,
  rep_suitability = 1,
  rep_blank = 2,
  repeat_std = 1,
  repeat_qc = 2,
  repeat_analyte = 1,
  repeat_dqc = 1,
  n_explore = 0,
  blank_after_top_conc = TRUE,
  blank_at_end = TRUE,
  blank_every_n = NULL,
  injec_vol,
  descr = "",
  prefix = Sys.Date(),
  suffix = "1",
  tray = 1,
  conc_df = NULL,
  grouped = TRUE
)

## S4 method for signature 'MultiPlate'
build_injec_seq(
  plate,
  method,
  rep_DB = 2,
  rep_ISblank = 1,
  rep_suitability = 1,
  rep_blank = 2,
  repeat_std = 1,
  repeat_qc = 1,
  repeat_analyte = 1,
  repeat_dqc = 1,
  n_explore = 0,
  blank_after_top_conc = TRUE,
  blank_at_end = TRUE,
  blank_every_n = NULL,
  injec_vol,
  descr = "",
  prefix = Sys.Date(),
  suffix = "1",
  tray = 1,
  conc_df = NULL,
  grouped = TRUE
)

Arguments

`plate`	PlateObj object
`method`	choose method from database
`rep_suitability`	Number of re-injections for suitability vial.
`repeat_std`	number of re-injections for calibration standards. Default is 1.
`repeat_qc`	number of re-injections for QC wells. Default is 1
`repeat_analyte`	number of re-injections for unknown samples. Default is 1
`n_explore`	A number of exploratory samples to be injected at the top of the entire sequence. Default is 0
`blank_after_top_conc`	If TRUE, adding blank after high concentrations of standards and QCS.
`blank_at_end`	If True, adding blank at the end of queue.
`blank_every_n`	If no QCs, frequency of injecting blanks between analytes.
`injec_vol`	volume of injection in micro liters.
`descr`	Run description.
`prefix`	string at the beginning of the filename. Default is today's date.
`suffix`	string to be added to the end of the filename. Default is "1".
`tray`	Location in sample manager.
`conc_df`	data.frame matching compound name to a scaling factor. Maximum 20 compounds allowed.