Presence-only model with Elastic Net penalty is a regularized generalized linear model training on the presence-absence response. This package provides functions for tuning and fitting the presence-only model. The presence-only model can be used to predict regulatory effects of genetic variants at sequence-level resolution by integrating a large number of epigenetic features and massively parallel reporter assays (MPRAs).
|Author||Zikun Yang [aut, cre, cph], Chen Wang [ctb], Iuliana Ionita-Laza [aut, ctb]|
|Maintainer||Zikun Yang <firstname.lastname@example.org>|
|License||GPL (>= 2)|
|Package repository||View on CRAN|
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