PSM: Non-Linear Mixed-Effects modelling using Stochastic Differential Equations.
Version 0.8-10

This package provides functions for estimation of linear and non-linear mixed-effects models using stochastic differential equations. Moreover it provides functions for finding smoothed estimates of model states and for simulation. The package allows for any multivariate non-linear time-variant model to be specified, and it also handles multidimensional input, co-variates, missing observations and specification of dosage regimen.

AuthorStig Bousgaard Mortensen <stigbm@gmail.com> and Sren Klim <soren@klimens.dk>
Date of publication2013-09-10 20:16:22
MaintainerStig Bousgaard Mortensen <stigbm@gmail.com>
LicenseGPL (>= 2)
Version0.8-10
URL http://www.imm.dtu.dk/psm
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("PSM")

Getting started

Package overview

Popular man pages

matexp: Matrix exponential
PSM.estimate: Estimate population parameters
PSM-internal: Internal functions in the PSM-package.
PSM-package: Population Stochastic Modelling
PSM.plot: Basic plots of data and output
PSM.simulate: Create simulation data for multiple individuals
PSM.smooth: Smoothing of model states based on estimated population...
See all...

All man pages Function index File listing

Man pages

matexp: Matrix exponential
PSM.estimate: Estimate population parameters
PSM-internal: Internal functions in the PSM-package.
PSM-package: Population Stochastic Modelling
PSM.plot: Basic plots of data and output
PSM.simulate: Create simulation data for multiple individuals
PSM.smooth: Smoothing of model states based on estimated population...
PSM.template: Creates a template for a model in PSM

Functions

APL.KF Man page
APL.KF.gr Man page
APL.KF.individualloop Man page
CutThirdDim Man page
ExtKalmanFilter Man page
ExtKalmanSmoother Man page
IndividualLL.KF Man page
IndividualLL.KF.gr Man page
LinKalmanFilter Man page
LinKalmanSmoother Man page
ModelCheck Man page
PSM Man page
PSM.estimate Man page
PSM.plot Man page
PSM.simulate Man page
PSM.smooth Man page
PSM.template Man page
invlogit Man page
logit Man page
matexp Man page

Files

PSM
PSM/inst
PSM/inst/doc
PSM/inst/doc/PSM.pdf
PSM/inst/doc/PSM.R
PSM/inst/doc/PSM.Rnw
PSM/src
PSM/src/Makevars
PSM/src/matutil95.f95
PSM/src/matutil77.f
PSM/src/LTI_KALMAN.f95
PSM/src/matexp.f
PSM/NAMESPACE
PSM/R
PSM/R/PSM.template.R
PSM/R/APL.KF.individualloop.R
PSM/R/PSM.estimate.R
PSM/R/logit.R
PSM/R/ModelCheck.R
PSM/R/ExtKalmanFilter.R
PSM/R/PSM.simulate.R
PSM/R/APL.KF.R
PSM/R/invlogit.R
PSM/R/IndividualLL.KF.R
PSM/R/PSM.smooth.R
PSM/R/ExtKalmanSmoother.R
PSM/R/PSM.plot.R
PSM/R/APL.KF.gr.R
PSM/R/IndividualLL.KF.gr.R
PSM/R/matexp.R
PSM/R/LinKalmanSmoother.R
PSM/R/CutThirdDim.R
PSM/R/LinKalmanFilter.R
PSM/R/zzz.R
PSM/vignettes
PSM/vignettes/simisr.RData
PSM/vignettes/images
PSM/vignettes/images/comp2dose.eps
PSM/vignettes/images/isrmodel.pdf
PSM/vignettes/images/isrmodel.eps
PSM/vignettes/images/comp2dose.pdf
PSM/vignettes/simdose.RData
PSM/vignettes/PSM.Rnw
PSM/MD5
PSM/DESCRIPTION
PSM/man
PSM/man/PSM.smooth.Rd
PSM/man/matexp.Rd
PSM/man/PSM.template.Rd
PSM/man/PSM.estimate.Rd
PSM/man/PSM-internal.Rd
PSM/man/PSM.simulate.Rd
PSM/man/PSM-package.Rd
PSM/man/PSM.plot.Rd
PSM documentation built on Jan. 15, 2017, 8:32 a.m.

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