ParallelPC: Paralellised Versions of Constraint Based Causal Discovery Algorithms

Parallelise constraint based causality discovery and causal inference methods. The parallelised algorithms in the package will generate the same results as that of the 'pcalg' package but will be much more efficient.

Author
Thuc Duy Le, Tao Hoang, Shu Hu, and Liang Zhang
Date of publication
2015-12-31 08:37:51
Maintainer
Thuc Duy Le <Thuc.Le@unisa.edu.au>
License
GPL (>= 2)
Version
1.2

View on CRAN

Man pages

cor2
The Pearson's correlation test
fci_parallel
Estimate a Partial Ancestral Graph using the FCI_parallel...
fci_stable
Estimate a PAG, using the FCI_stable algorithm
IDA_parallel
Estimate Total Causal Effects using the IDA_parallel...
IDA_stable
Estimate Total Causal Effects
jointIDA_direct
Estimate Total Causal Effects of Joint Interventions
jointIDA_parallel
Estimate Total Causal Effects of Joint Interventions
mccor
The Monte Carlo permutation test (mc-cor)
mcmig
The Monte Carlo permutation test (mc-mi-g)
mczf
The Monte Carlo permutation test for Gaussian conditional...
mig
Mutual information test
migsh
Shrinkage estimator for the mutual information (mi-g-sh)
pc_parallel
Estimate the Equivalence Class of a DAG using the PC_parallel...
pcSelect_parallel
Estimate subgraph around a response variable using...
pcSelect_stable
Estimate subgraph around a response variable using pcSelect
pc_stable
Estimate the Equivalence Class of a DAG using the PC_stable...
rfci_parallel
Estimate a PAG fast using the RFCI_parallel Algorithm
rfci_stable
Estimate a PAG using the RFCI_stable Algorithm
skeleton_parallel
Estimate (Initial) Skeleton of a DAG.
skeleton_stable
Estimate (Initial) Skeleton of a DAG using the PC_stable...
smccor
The sequential Monte Carlo permutation test (smc-cor)
smcmig
The sequential Monte Carlo permutation test (smc-mi-g)
smczf
The sequential Monte Carlo permutation test for Gaussian...
zf
Gaussian conditional independence test

Files in this package

ParallelPC
ParallelPC/inst
ParallelPC/inst/CITATION
ParallelPC/NAMESPACE
ParallelPC/R
ParallelPC/R/ParallelPC.R
ParallelPC/MD5
ParallelPC/DESCRIPTION
ParallelPC/man
ParallelPC/man/IDA_stable.Rd
ParallelPC/man/fci_parallel.Rd
ParallelPC/man/mig.Rd
ParallelPC/man/mccor.Rd
ParallelPC/man/skeleton_parallel.Rd
ParallelPC/man/rfci_stable.Rd
ParallelPC/man/mcmig.Rd
ParallelPC/man/jointIDA_parallel.Rd
ParallelPC/man/mczf.Rd
ParallelPC/man/migsh.Rd
ParallelPC/man/pc_stable.Rd
ParallelPC/man/smccor.Rd
ParallelPC/man/zf.Rd
ParallelPC/man/jointIDA_direct.Rd
ParallelPC/man/rfci_parallel.Rd
ParallelPC/man/smczf.Rd
ParallelPC/man/pc_parallel.Rd
ParallelPC/man/smcmig.Rd
ParallelPC/man/skeleton_stable.Rd
ParallelPC/man/pcSelect_parallel.Rd
ParallelPC/man/fci_stable.Rd
ParallelPC/man/IDA_parallel.Rd
ParallelPC/man/cor2.Rd
ParallelPC/man/pcSelect_stable.Rd