Man pages for PhyloMeasures
Fast and Exact Algorithms for Computing Phylogenetic Biodiversity Measures
| cac.moments | Computes the statistical moments of the Core Ancestor Cost... |
| cac.pvalues | Computes the p-values of the Core Ancestor Cost measure |
| cac.query | Computes the (standardized) value of the Core Ancestor Cost... |
| cbl.moments | Computes the moments of the Common Branch Length measure... |
| cbl.query | Computes the (standardized) value of the Common Branch Length... |
| cd.moments | Computes the moments of the Community Distance measure under... |
| cdnt.averaged.query | Computes the value of the averaged Community Distance Nearest... |
| cdnt.directed.query | Computes the value of the directed Community Distance Nearest... |
| cdnt.query | Computes the value of the maximised Community Distance... |
| cd.query | Computes the (standardized) value of the Community Distance... |
| mntd.moments | Computes the moments of the Mean Nearest Taxon Distance... |
| mntd.pvalues | Computes the p-values of the Mean Nearest Taxon Distance... |
| mntd.query | Computes the (standardized) value of the Mean Nearest Taxon... |
| mpd.moments | Computes the moments of the Mean Pairwise Distance measure |
| mpd.pvalues | Computes the p-values of the Mean Pairwise Distance measure |
| mpd.query | Computes the (standardized) value of the Mean Pairwise... |
| pd.moments | Computes the moments of the Phylogenetic Diversity measure |
| pd.pvalues | Computes the p-values of the unrooted Phylogenetic Diversity... |
| pd.query | Computes the (standardized) value of the unrooted... |
| PhyloMeasures-package | PhyloMeasures: Fast Computations of Phylogenetic Biodiversity... |
| phylosor.query | Computes the value of the Phylogenetic Sorensen's Similarity... |
| unifrac.query | Computes the value of the Unique Fraction measure |
