QCGWAS: Quality Control of Genome Wide Association Study results

Tools for (automated and manual) quality control of the results of Genome Wide Association Studies

AuthorPeter J. van der Most and Ilja M. Nolte
Date of publication2014-02-12 14:42:16
MaintainerPeter J. van der Most <p.j.van.der.most@umcg.nl>
LicenseGPL (>= 3)
Version1.0-8

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Files in this package

QCGWAS
QCGWAS/inst
QCGWAS/inst/CITATION
QCGWAS/inst/doc
QCGWAS/inst/doc/QCGWAS_v10-8_documentation.doc
QCGWAS/inst/doc/QCGWAS_v10_8_manual.pdf
QCGWAS/inst/doc/QCGWAS_v10-8_quick_start_guide.doc
QCGWAS/inst/doc/header_translations.txt
QCGWAS/NAMESPACE
QCGWAS/data
QCGWAS/data/gwa_sample.rda
QCGWAS/data/header_translations.rda
QCGWAS/R
QCGWAS/R/QC_plots.R QCGWAS/R/plot_precision.R QCGWAS/R/calc_skewness.R QCGWAS/R/check_P.R QCGWAS/R/QQ_series.R QCGWAS/R/translate_header.R QCGWAS/R/plot_regional.R QCGWAS/R/convert_impstatus.R QCGWAS/R/QQ_plot.R QCGWAS/R/HQ_filter.R QCGWAS/R/switch_strand.R QCGWAS/R/plot_skewness.R QCGWAS/R/QC_series.R QCGWAS/R/QCGWAS-internal.R QCGWAS/R/calc_kurtosis.R QCGWAS/R/load_test.R QCGWAS/R/histogram_series.R QCGWAS/R/match_alleles.R QCGWAS/R/QC_GWAS.R QCGWAS/R/plot_distribution.R QCGWAS/R/identify_column.R QCGWAS/R/save_log.R QCGWAS/R/load_GWAS.R QCGWAS/R/filter_GWAS.R QCGWAS/R/create_hapmap_reference.R QCGWAS/R/QC_histogram.R QCGWAS/R/intensity_plot.R
QCGWAS/MD5
QCGWAS/DESCRIPTION
QCGWAS/man
QCGWAS/man/QC_histogram.Rd QCGWAS/man/HQ_filter.Rd QCGWAS/man/QQ_plot.Rd QCGWAS/man/plot_regional.Rd QCGWAS/man/convert_impstatus.Rd QCGWAS/man/plot_skewness.Rd QCGWAS/man/check_P.Rd QCGWAS/man/plot_distribution.Rd QCGWAS/man/plot_precision.Rd QCGWAS/man/QC_plots.Rd QCGWAS/man/save_log.Rd QCGWAS/man/QCGWAS-package.Rd QCGWAS/man/load_GWAS.Rd QCGWAS/man/translate_header.Rd QCGWAS/man/match_alleles.Rd QCGWAS/man/filter_GWAS.Rd QCGWAS/man/create_hapmap_reference.Rd QCGWAS/man/gwa_sample.Rd QCGWAS/man/calc_kurtosis.Rd QCGWAS/man/QC_GWAS.Rd QCGWAS/man/header_translations.Rd QCGWAS/man/switch_strand.Rd QCGWAS/man/identify_column.Rd QCGWAS/man/intensity_plot.Rd

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